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通过STD-NMR和计算机模拟研究探索维生素B12与蛋白质之间的分子识别模式。

Molecular Recognition Patterns between Vitamin B12 and Proteins Explored through STD-NMR and In Silico Studies.

作者信息

Ghosh Ruchira, Thomas Donald S, Arcot Jayashree

机构信息

Food and Health, School of Chemical Engineering, UNSW Sydney, Sydney, NSW 2052, Australia.

NMR Facility, UNSW Sydney, Sydney, NSW 2052, Australia.

出版信息

Foods. 2023 Jan 28;12(3):575. doi: 10.3390/foods12030575.

DOI:10.3390/foods12030575
PMID:36766105
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9914923/
Abstract

Ligand-receptor molecular recognition is the basis of biological processes. The Saturation Transfer Difference-NMR (STD-NMR) technique has been recently used to gain qualitative and quantitative information about physiological interactions at an atomic resolution. The molecular recognition patterns between the cyanocobalamin (CNBL)/aqua cobalamin (OHBL) and different plant and animal proteins were investigated via STD-NMR supplemented by molecular docking. This study demonstrates that myoglobin has the highest binding affinity and that gluten has the lowest affinity. Casein also shows a higher binding affinity for cyanocobalamin when compared with that of plant-based proteins. STD-NMR results showed the moderate binding capability of casein with both CNBL and OHBL. Computer simulation confirmed the recognition mode in theory and was compared with the experiments. This work is beneficial for understanding the binding affinity and biological action of cyanocobalamin and will attract researchers to use NMR technology to link the chemical and physiological properties of nutrients.

摘要

配体-受体分子识别是生物过程的基础。饱和转移差分核磁共振(STD-NMR)技术最近已被用于在原子分辨率下获取有关生理相互作用的定性和定量信息。通过分子对接辅助的STD-NMR研究了氰钴胺(CNBL)/水合钴胺(OHBL)与不同动植物蛋白之间的分子识别模式。本研究表明,肌红蛋白具有最高的结合亲和力,而谷蛋白具有最低的亲和力。与植物性蛋白质相比,酪蛋白对氰钴胺也表现出更高的结合亲和力。STD-NMR结果表明酪蛋白与CNBL和OHBL均具有中等结合能力。计算机模拟从理论上证实了识别模式,并与实验进行了比较。这项工作有助于理解氰钴胺的结合亲和力和生物学作用,并将吸引研究人员使用核磁共振技术来联系营养素的化学和生理特性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e651/9914923/683860c230a8/foods-12-00575-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e651/9914923/c62bda3b0ee6/foods-12-00575-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e651/9914923/683860c230a8/foods-12-00575-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e651/9914923/c62bda3b0ee6/foods-12-00575-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e651/9914923/683860c230a8/foods-12-00575-g002.jpg

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Ecotoxicol Environ Saf. 2022 Mar 15;233:113323. doi: 10.1016/j.ecoenv.2022.113323. Epub 2022 Feb 17.
2
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3
Foods. 2024 May 18;13(10):1576. doi: 10.3390/foods13101576.
4
Deep Plasma Proteome Profiling by Modulating Single Nanoparticle Protein Corona with Small Molecules.通过小分子调控单个纳米颗粒蛋白质冠层进行深度血浆蛋白质组分析
bioRxiv. 2024 Sep 9:2024.03.06.582595. doi: 10.1101/2024.03.06.582595.
Interaction of vitamin B12 with β-lactoglobulin: a computational study.
维生素 B12 与 β-乳球蛋白的相互作用:计算研究。
J Biomol Struct Dyn. 2022 Mar;40(5):2146-2155. doi: 10.1080/07391102.2020.1835731. Epub 2020 Oct 19.
4
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Acta Pharmacol Sin. 2020 Jan;41(1):138-144. doi: 10.1038/s41401-019-0228-6. Epub 2019 Jul 1.
5
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J Dairy Sci. 2019 Jun;102(6):4891-4905. doi: 10.3168/jds.2018-15016. Epub 2019 Mar 28.
6
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7
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Carbohydr Polym. 2018 Aug 15;194:294-302. doi: 10.1016/j.carbpol.2018.04.055. Epub 2018 Apr 17.
8
Characterization of Ligand Binding by Saturation Transfer Difference NMR Spectroscopy.通过饱和转移差核磁共振波谱法对配体结合进行表征
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9
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Phys Chem Chem Phys. 2018 Apr 4;20(14):9256-9268. doi: 10.1039/C7CP08298C.
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Angew Chem Int Ed Engl. 2017 Nov 27;56(48):15289-15293. doi: 10.1002/anie.201707682. Epub 2017 Oct 23.