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利用超声图像增强和集成预测防止机器学习模型过拟合。

Using Ultrasound Image Augmentation and Ensemble Predictions to Prevent Machine-Learning Model Overfitting.

作者信息

Snider Eric J, Hernandez-Torres Sofia I, Hennessey Ryan

机构信息

U.S. Army Institute of Surgical Research, JBSA Fort Sam Houston, San Antonio, TX 78234, USA.

出版信息

Diagnostics (Basel). 2023 Jan 23;13(3):417. doi: 10.3390/diagnostics13030417.

Abstract

Deep learning predictive models have the potential to simplify and automate medical imaging diagnostics by lowering the skill threshold for image interpretation. However, this requires predictive models that are generalized to handle subject variability as seen clinically. Here, we highlight methods to improve test accuracy of an image classifier model for shrapnel identification using tissue phantom image sets. Using a previously developed image classifier neural network-termed ShrapML-blind test accuracy was less than 70% and was variable depending on the training/test data setup, as determined by a leave one subject out (LOSO) holdout methodology. Introduction of affine transformations for image augmentation or MixUp methodologies to generate additional training sets improved model performance and overall accuracy improved to 75%. Further improvements were made by aggregating predictions across five LOSO holdouts. This was done by bagging confidences or predictions from all LOSOs or the top-3 LOSO confidence models for each image prediction. Top-3 LOSO confidence bagging performed best, with test accuracy improved to greater than 85% accuracy for two different blind tissue phantoms. This was confirmed by gradient-weighted class activation mapping to highlight that the image classifier was tracking shrapnel in the image sets. Overall, data augmentation and ensemble prediction approaches were suitable for creating more generalized predictive models for ultrasound image analysis, a critical step for real-time diagnostic deployment.

摘要

深度学习预测模型有潜力通过降低图像解读的技能门槛来简化和自动化医学成像诊断。然而,这需要能够处理临床上所见个体差异的预测模型。在此,我们重点介绍了使用组织体模图像集提高用于弹片识别的图像分类器模型测试准确性的方法。使用先前开发的图像分类器神经网络(称为ShrapML)——通过留一受试者法(LOSO)验证方法确定,盲法测试准确性低于70%,并且根据训练/测试数据设置而有所不同。引入用于图像增强的仿射变换或MixUp方法来生成额外的训练集,可提高模型性能,总体准确性提高到75%。通过汇总五个LOSO验证集的预测结果进一步提高了准确性。这是通过对所有LOSO验证集的置信度或预测结果进行装袋,或者对每个图像预测采用前3个LOSO验证集的置信度模型来实现的。前3个LOSO验证集置信度装袋效果最佳,对于两种不同的盲法组织体模,测试准确性提高到了85%以上。梯度加权类激活映射证实了这一点,突出显示图像分类器正在跟踪图像集中的弹片。总体而言,数据增强和集成预测方法适用于创建更通用的超声图像分析预测模型,这是实时诊断部署的关键一步。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dd2/9914871/1102b77fa185/diagnostics-13-00417-g001.jpg

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