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4-甲基伞形酮通过公共数据分析和肝转录组测序揭示的靶点。

4-Methylumbelliferone Targets Revealed by Public Data Analysis and Liver Transcriptome Sequencing.

机构信息

Koltzov Institute of Developmental Biology, 26 Vavilov Str., 119334 Moscow, Russia.

Ilse Katz Institute for Nanoscale Science & Technology, Ben-Gurion University of the Negev, Beer-Sheva P.O. Box 653, Israel.

出版信息

Int J Mol Sci. 2023 Jan 21;24(3):2129. doi: 10.3390/ijms24032129.

Abstract

4-methylumbelliferone (4MU) is a well-known hyaluronic acid synthesis inhibitor and an approved drug for the treatment of cholestasis. In animal models, 4MU decreases inflammation, reduces fibrosis, and lowers body weight, serum cholesterol, and insulin resistance. It also inhibits tumor progression and metastasis. The broad spectrum of effects suggests multiple and yet unknown targets of 4MU. Aiming at 4MU target deconvolution, we have analyzed publicly available data bases, including: 1. Small molecule library Bio Assay screening (PubChemBioAssay); 2. GO pathway databases screening; 3. Protein Atlas Database. We also performed comparative liver transcriptome analysis of mice on normal diet and mice fed with 4MU for two weeks. Potential targets of 4MU public data base analysis fall into two big groups, enzymes and transcription factors (TFs), including 13 members of the nuclear receptor superfamily regulating lipid and carbohydrate metabolism. Transcriptome analysis revealed changes in the expression of genes involved in bile acid metabolism, gluconeogenesis, and immune response. It was found that 4MU feeding decreased the accumulation of the glycogen granules in the liver. Thus, 4MU has multiple targets and can regulate cell metabolism by modulating signaling via nuclear receptors.

摘要

4-甲基伞形酮(4MU)是一种众所周知的透明质酸合成抑制剂,也是一种用于治疗胆汁淤积的批准药物。在动物模型中,4MU 可减轻炎症、减少纤维化并降低体重、血清胆固醇和胰岛素抵抗。它还抑制肿瘤的进展和转移。其广泛的作用表明 4MU 具有多个未知的靶点。为了对 4MU 的靶点进行解析,我们分析了公开可用的数据库,包括:1. 小分子文库生物测定筛选(PubChemBioAssay);2. GO 通路数据库筛选;3. 蛋白质图谱数据库。我们还对正常饮食和用 4MU 喂养两周的小鼠的肝脏转录组进行了比较分析。4MU 公共数据库分析的潜在靶点分为两类,即酶和转录因子(TFs),包括调节脂质和碳水化合物代谢的核受体超家族的 13 个成员。转录组分析显示参与胆汁酸代谢、糖异生和免疫反应的基因表达发生变化。研究发现,4MU 喂养可减少肝脏中糖原颗粒的积累。因此,4MU 具有多个靶点,可通过调节核受体的信号通路来调节细胞代谢。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73d8/9917189/df5befc5b08c/ijms-24-02129-g001.jpg

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