枣椰树废弃物堆肥施用对大麦(L.)根系蛋白质组变化的影响

Effects of Date Palm Waste Compost Application on Root Proteome Changes of Barley ( L.).

作者信息

Ghouili Emna, Sassi Khaled, Hidri Yassine, M'Hamed Hatem Cheikh, Somenahally Anil, Xue Qingwu, Jebara Moez, Nefissi Ouertani Rim, Riahi Jouhaina, de Oliveira Ana Caroline, Abid Ghassen, Muhovski Yordan

机构信息

Laboratory of Legumes and Sustainable Agrosystems, Centre of Biotechnology of Borj-Cedria, (L2AD, CBBC), P.O. Box 901, Hammam-Lif 2050, Tunisia.

Laboratory of Agronomy, National Agronomy Institute of Tunisia (INAT), University of Carthage, Avenue Charles Nicolle, Tunis-Mahrajène, P.O. Box 43, Tunis 1082, Tunisia.

出版信息

Plants (Basel). 2023 Jan 23;12(3):526. doi: 10.3390/plants12030526.

Abstract

Proteomic analysis was performed to investigate the differentially abundant proteins (DAPs) in barley roots during the tillering stage. Bioinformatic tools were used to interpret the biological function, the pathway analysis and the visualisation of the network amongst the identified proteins. A total of 72 DAPs (33 upregulated and 39 downregulated) among a total of 2580 proteins were identified in response to compost treatment, suggesting multiple pathways of primary and secondary metabolism, such as carbohydrates and energy metabolism, phenylpropanoid pathway, glycolysis pathway, protein synthesis and degradation, redox homeostasis, RNA processing, stress response, cytoskeleton organisation, and phytohormone metabolic pathways. The expression of DAPs was further validated by qRT-PCR. The effects on barley plant development, such as the promotion of root growth and biomass increase, were associated with a change in energy metabolism and protein synthesis. The activation of enzymes involved in redox homeostasis and the regulation of stress response proteins suggest a protective effect of compost, consequently improving barley growth and stress acclimation through the reduction of the environmental impact of productive agriculture. Overall, these results may facilitate a better understanding of the molecular mechanism of compost-promoted plant growth and provide valuable information for the identification of critical genes/proteins in barley as potential targets of compost.

摘要

进行蛋白质组学分析以研究分蘖期大麦根中差异丰富的蛋白质(DAPs)。使用生物信息学工具来解释所鉴定蛋白质之间的生物学功能、通路分析和网络可视化。在总共2580种蛋白质中,共鉴定出72种DAPs(33种上调和39种下调)以响应堆肥处理,这表明存在初级和次级代谢的多种途径,如碳水化合物和能量代谢、苯丙烷途径、糖酵解途径、蛋白质合成和降解、氧化还原稳态、RNA加工、应激反应、细胞骨架组织和植物激素代谢途径。通过qRT-PCR进一步验证了DAPs的表达。对大麦植株发育的影响,如促进根系生长和生物量增加,与能量代谢和蛋白质合成的变化有关。参与氧化还原稳态的酶的激活和应激反应蛋白的调节表明堆肥具有保护作用,从而通过减少生产性农业对环境的影响来改善大麦生长和应激适应能力。总体而言,这些结果可能有助于更好地理解堆肥促进植物生长的分子机制,并为鉴定大麦中作为堆肥潜在靶点的关键基因/蛋白质提供有价值的信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dded/9921465/b0fb3e53d352/plants-12-00526-g001.jpg

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