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利用 CRISPR-Cas 筛选技术革新 DNA 修复研究和癌症治疗。

Revolutionizing DNA repair research and cancer therapy with CRISPR-Cas screens.

机构信息

Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge, UK.

The Gurdon Institute and Department of Biochemistry, University of Cambridge, Cambridge, UK.

出版信息

Nat Rev Mol Cell Biol. 2023 Jul;24(7):477-494. doi: 10.1038/s41580-022-00571-x. Epub 2023 Feb 13.

Abstract

All organisms possess molecular mechanisms that govern DNA repair and associated DNA damage response (DDR) processes. Owing to their relevance to human disease, most notably cancer, these mechanisms have been studied extensively, yet new DNA repair and/or DDR factors and functional interactions between them are still being uncovered. The emergence of CRISPR technologies and CRISPR-based genetic screens has enabled genome-scale analyses of gene-gene and gene-drug interactions, thereby providing new insights into cellular processes in distinct DDR-deficiency genetic backgrounds and conditions. In this Review, we discuss the mechanistic basis of CRISPR-Cas genetic screening approaches and describe how they have contributed to our understanding of DNA repair and DDR pathways. We discuss how DNA repair pathways are regulated, and identify and characterize crosstalk between them. We also highlight the impacts of CRISPR-based studies in identifying novel strategies for cancer therapy, and in understanding, overcoming and even exploiting cancer-drug resistance, for example in the contexts of PARP inhibition, homologous recombination deficiencies and/or replication stress. Lastly, we present the DDR CRISPR screen (DDRcs) portal , in which we have collected and reanalysed data from CRISPR screen studies and provide a tool for systematically exploring them.

摘要

所有生物体都拥有控制 DNA 修复和相关 DNA 损伤反应 (DDR) 过程的分子机制。由于这些机制与人类疾病(尤其是癌症)密切相关,因此已经进行了广泛的研究,但新的 DNA 修复和/或 DDR 因子及其之间的功能相互作用仍在不断被发现。CRISPR 技术和基于 CRISPR 的遗传筛选的出现,使得对基因-基因和基因-药物相互作用的全基因组分析成为可能,从而为不同 DDR 缺陷遗传背景和条件下的细胞过程提供了新的见解。在这篇综述中,我们讨论了 CRISPR-Cas 遗传筛选方法的机制基础,并描述了它们如何帮助我们理解 DNA 修复和 DDR 途径。我们讨论了 DNA 修复途径是如何被调控的,并确定和描述了它们之间的相互作用。我们还强调了基于 CRISPR 的研究在确定癌症治疗的新策略、理解、克服甚至利用癌症药物耐药性方面的作用,例如在 PARP 抑制、同源重组缺陷和/或复制应激的情况下。最后,我们介绍了 DDR CRISPR 筛选 (DDRcs) 门户,其中我们收集和重新分析了来自 CRISPR 筛选研究的数据,并提供了一个系统探索它们的工具。

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