Garcias-Morales David, Palomar V Miguel, Charlot Florence, Nogué Fabien, Covarrubias Alejandra A, Reyes José L
Departamento de Biología Molecular de Plantas, Instituto de Biotecnología, UNAM, Av. Universidad 2001, Cuernavaca, CP, 62210, Mexico.
Department of Molecular, Cellular and Developmental Biology, University of Michigan, 1105 N. University Ave, Ann Arbor, MI, 48109-1085, USA.
Plant J. 2023 Apr;114(1):7-22. doi: 10.1111/tpj.16149. Epub 2023 Mar 9.
Plants colonized the land approximately 470 million years ago, coinciding with the development of apical cells that divide in three planes. The molecular mechanisms that underly the development of the 3D growth pattern are poorly understood, mainly because 3D growth in seed plants starts during embryo development. In contrast, the transition from 2D to 3D growth in the moss Physcomitrium patens has been widely studied, and it involves a large turnover of the transcriptome to allow the establishment of stage-specific transcripts that facilitate this developmental transition. N -Methyladenosine (m A) is the most abundant, dynamic and conserved internal nucleotide modification present on eukaryotic mRNA and serves as a layer of post-transcriptional regulation directly affecting several cellular processes and developmental pathways in many organisms. In Arabidopsis, m A has been reported to be essential for organ growth and determination, embryo development and responses to environmental signals. In this study, we identified the main genes of the m A methyltransferase complex (MTC), MTA, MTB and FIP37, in P. patens and demonstrate that their inactivation leads to the loss of m A in mRNA, a delay in the formation of gametophore buds and defects in spore development. Genome-wide analysis revealed several transcripts affected in the Ppmta background. We demonstrate that the PpAPB1-PpAPB4 transcripts, encoding central factors orchestrating the transition from 2D to 3D growth in P. patens, are modified by m A, whereas in the Ppmta mutant the lack of the m A marker is associated with a corresponding decrease in transcript accumulation. Overall, we suggest that m A is essential to enable the proper accumulation of these and other bud-specific transcripts directing the turnover of stage-specific transcriptomes, and thus promoting the transition from protonema to gametophore buds in P. patens.
植物大约在4.7亿年前开始在陆地上定殖,这与在三个平面上分裂的顶端细胞的发育相吻合。三维生长模式发育背后的分子机制尚不清楚,主要是因为种子植物的三维生长始于胚胎发育阶段。相比之下,苔藓小立碗藓从二维生长向三维生长的转变已得到广泛研究,这一转变涉及转录组的大量更新,以建立促进这一发育转变的阶段特异性转录本。N -甲基腺苷(m⁶A)是真核生物mRNA上存在的最丰富、动态且保守的内部核苷酸修饰,它作为转录后调控的一层,直接影响许多生物体中的多个细胞过程和发育途径。在拟南芥中,m⁶A已被报道对于器官生长与决定、胚胎发育以及对环境信号的响应至关重要。在本研究中,我们在小立碗藓中鉴定出了m⁶A甲基转移酶复合物(MTC)的主要基因MTA、MTB和FIP37,并证明它们的失活会导致mRNA中m⁶A的缺失、配子体芽形成延迟以及孢子发育缺陷。全基因组分析揭示了在Ppmta背景下受影响的多个转录本。我们证明,编码协调小立碗藓从二维生长向三维生长转变的核心因子的PpAPB1 - PpAPB4转录本被m⁶A修饰,而在Ppmta突变体中,m⁶A标记的缺失与转录本积累的相应减少相关。总体而言,我们认为m⁶A对于使这些以及其他指导阶段特异性转录组更新的芽特异性转录本正确积累至关重要,从而促进小立碗藓从原丝体向配子体芽的转变。