Center for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, Lausanne, Switzerland.
Elife. 2023 Feb 20;12:e85537. doi: 10.7554/eLife.85537.
Insect odorant receptors and gustatory receptors define a superfamily of seven transmembrane domain ion channels (referred to here as 7TMICs), with homologs identified across Animalia except Chordata. Previously, we used sequence-based screening methods to reveal conservation of this family in unicellular eukaryotes and plants (DUF3537 proteins) (Benton et al., 2020). Here, we combine three-dimensional structure-based screening, ab initio protein folding predictions, phylogenetics, and expression analyses to characterize additional candidate homologs with tertiary but little or no primary structural similarity to known 7TMICs, including proteins in disease-causing . Unexpectedly, we identify structural similarity between 7TMICs and PHTF proteins, a deeply conserved family of unknown function, whose human orthologs display enriched expression in testis, cerebellum, and muscle. We also discover divergent groups of 7TMICs in insects, which we term the gustatory receptor-like (Grl) proteins. Several s display selective expression in subsets of taste neurons, suggesting that they are previously unrecognized insect chemoreceptors. Although we cannot exclude the possibility of remarkable structural convergence, our findings support the origin of 7TMICs in a eukaryotic common ancestor, counter previous assumptions of complete loss of 7TMICs in Chordata, and highlight the extreme evolvability of this protein fold, which likely underlies its functional diversification in different cellular contexts.
昆虫气味受体和味觉受体定义了一个七跨膜域离子通道的超家族(这里称为 7TMICs),除了脊索动物以外,在动物界的所有动物中都有同源物。此前,我们使用基于序列的筛选方法揭示了该家族在单细胞真核生物和植物中的保守性(DUF3537 蛋白)(Benton 等人,2020 年)。在这里,我们结合三维结构筛选、从头蛋白质折叠预测、系统发育和表达分析,来鉴定具有三级结构但与已知 7TMICs 几乎没有或没有一级结构相似性的其他候选同源物,包括在致病蛋白中的同源物。出乎意料的是,我们发现 7TMICs 与 PHTF 蛋白之间存在结构相似性,PHTF 蛋白是一个深度保守的未知功能家族,其人类同源物在睾丸、小脑和肌肉中表达丰富。我们还在昆虫中发现了 7TMICs 的不同分支,我们将其称为味觉受体样(Grl)蛋白。有几个 s 显示在味觉神经元的亚群中选择性表达,这表明它们是以前未被识别的昆虫化学感受器。尽管我们不能排除显著的结构趋同的可能性,但我们的发现支持 7TMICs 起源于真核生物的共同祖先,这与以前关于 7TMICs 在脊索动物中完全缺失的假设相矛盾,并突出了这种蛋白质折叠的极端可变性,这可能是其在不同细胞环境中功能多样化的基础。