Laboratory for Phyloinformatics, RIKEN Center for Biosystems Dynamics Research (BDR), Kobe, Japan.
Department of Biology, Graduate School of Science, Kobe University, Kobe, Japan.
Genome Biol Evol. 2023 Mar 3;15(3). doi: 10.1093/gbe/evad028.
Reproductive modes of vertebrates are classified into two major embryonic nutritional types: yolk deposits (i.e., lecithotrophy) and maternal investment (i.e., matrotrophy). Vitellogenin (VTG), a major egg yolk protein synthesized in the female liver, is one of the molecules relevant to the lecithotrophy-to-matrotrophy shift in bony vertebrates. In mammals, all VTG genes are lost following the lecithotrophy-to-matrotrophy shift, and it remains to be elucidated whether the lecithotrophy-to-matrotrophy shift in nonmammalians is also associated with VTG repertoire modification. In this study, we focused on chondrichthyans (cartilaginous fishes)-a vertebrate clade that underwent multiple lecithotrophy-to-matrotrophy shifts. For an exhaustive search of homologs, we performed tissue-by-tissue transcriptome sequencing for two viviparous chondrichthyans, the frilled shark Chlamydoselachus anguineus and the spotless smooth-hound Mustelus griseus, and inferred the molecular phylogeny of VTG and its receptor very low-density lipoprotein receptor (VLDLR), across diverse vertebrates. As a result, we identified either three or four VTG orthologs in chondrichthyans including viviparous species. We also showed that chondrichthyans had two additional VLDLR orthologs previously unrecognized in their unique lineage (designated as VLDLRc2 and VLDLRc3). Notably, VTG gene expression patterns differed in the species studied depending on their reproductive mode; VTGs are broadly expressed in multiple tissues, including the uterus, in the two viviparous sharks, and in addition to the liver. This finding suggests that the chondrichthyans VTGs do not only function as the yolk nutrient but also as the matrotrophic factor. Altogether, our study indicates that the lecithotrophy-to-matrotrophy shift in chondrichthyans was achieved through a distinct evolutionary process from mammals.
卵黄沉积(即卵黄营养)和母体投资(即卵母营养)。卵黄蛋白原(VTG)是一种在雌性肝脏中合成的主要卵黄蛋白,是硬骨鱼类从卵黄营养到卵母营养转变相关的分子之一。在哺乳动物中,所有 VTG 基因在从卵黄营养到卵母营养的转变后都会丢失,而在非哺乳动物中,从卵黄营养到卵母营养的转变是否也与 VTG 库修饰有关,仍有待阐明。在这项研究中,我们专注于软骨鱼类(软骨鱼)——一个经历了多次从卵黄营养到卵母营养转变的脊椎动物分支。为了全面搜索同源物,我们对两种有胎盘的软骨鱼类,皱鳃鲨 Chlamydoselachus anguineus 和无斑灰真鲨 Mustelus griseus,进行了组织到组织的转录组测序,并推断了 VTG 及其受体极低密度脂蛋白受体(VLDLR)在不同脊椎动物中的分子系统发育。结果,我们在软骨鱼类中发现了 3 个或 4 个 VTG 直系同源物,包括有胎盘物种。我们还表明,软骨鱼类在其独特的谱系中还有另外两个以前未被识别的 VLDLR 直系同源物(分别命名为 VLDLRc2 和 VLDLRc3)。值得注意的是,在所研究的物种中,根据其生殖方式,VTG 基因表达模式不同;VTGs 在多种组织中广泛表达,包括子宫,在这两种有胎盘鲨鱼中,以及除了肝脏之外。这一发现表明,软骨鱼类的 VTG 不仅作为卵黄营养物质,而且作为卵母营养因子。总的来说,我们的研究表明,软骨鱼类从卵黄营养到卵母营养的转变是通过与哺乳动物不同的进化过程实现的。