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利用 SYBR Green I 实现解旋酶依赖性扩增,快速肉眼检测血小板制品中的细菌污染物。

Implementation of helicase-dependent amplification with SYBR Green I for prompt naked-eye detection of bacterial contaminants in platelet products.

机构信息

Program of Molecular Sciences in Medical Microbiology and Immunology, Faculty of Allied Health Sciences, Chulalongkorn University, Bangkok, 10330, Thailand.

Microbiology Unit, Faculty of Medicine Ramathibodi Hospital, Mahidol University, Bangkok, 10400, Thailand.

出版信息

Sci Rep. 2023 Feb 24;13(1):3238. doi: 10.1038/s41598-023-30410-8.

Abstract

Platelet transfusions may lead to more significant risks of infection and septic transfusion reactions that can be fatal to the recipient. Platelet products should be screened to limit or detect bacterial contamination before application to patients to minimise any adverse reactions. This study aimed to develop a helicase-dependent amplification (HDA) technique targeting a universal highly conserved bacterial gene, 16S rRNA, in combination with naked-eye detection using SYBR Green I (HDA/SYBR Green I) to detect bacterial contamination in platelet products. Thirty positive samples were obtained from spiked platelet products by five transfusion-relevant bacterial strains and were screened for bacterial contamination by HDA/SYBR Green I. HDA/SYBR Green I showed an enhanced yield of bacterial contaminant detection when performed with medium to late shelf life, Day 2 of storage or later platelet products (98.67% sensitivity and 100% specificity compared to the BACT/ALERT culture system). The limit of detection of HDA/SYBR Green I was 1 ng, and there was no cross-reaction with other organisms that could likely contaminate platelet products. The developed HDA/SYBR Green I assay is rapid and simplistic and only requires an easy-to-find heat box, available in general blood bank laboratories, for the amplification step. This technique is suitable for further development as an alternative method to detect bacterial contamination in platelet products in the near future.

摘要

血小板输注可能会导致更严重的感染和脓毒性输血反应,从而对受血者造成致命的影响。血小板制品在应用于患者之前应进行筛选,以限制或检测细菌污染,从而最大程度地减少任何不良反应。本研究旨在开发一种基于解旋酶依赖性扩增(HDA)技术的方法,该方法针对细菌 16S rRNA 基因的高度保守序列,结合使用 SYBR Green I 进行裸眼检测(HDA/SYBR Green I),以检测血小板制品中的细菌污染。通过 5 种与输血相关的细菌菌株对添加血小板制品中的阳性样本进行了 30 次检测,并用 HDA/SYBR Green I 筛查细菌污染。当使用中期至晚期货架期、储存第 2 天或更晚的血小板制品时,HDA/SYBR Green I 对细菌污染物的检测显示出更高的产量(与 BACT/ALERT 培养系统相比,灵敏度为 98.67%,特异性为 100%)。HDA/SYBR Green I 的检测限为 1ng,并且与可能污染血小板制品的其他生物体没有交叉反应。开发的 HDA/SYBR Green I 检测方法快速而简单,仅需要一个易于找到的热盒(通常在一般血库实验室中都有)进行扩增步骤。该技术适合进一步开发,作为一种替代方法,以检测血小板制品中的细菌污染。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c5cc/9958189/4a792d3fa752/41598_2023_30410_Fig1_HTML.jpg

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