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MATR3低表达与透明细胞肾细胞癌患者的不良生存相关。

Low Expression of MATR3 Is Associated with Poor Survival in Clear Cell Renal Cell Carcinoma.

作者信息

Durślewicz Justyna, Klimaszewska-Wiśniewska Anna, Antosik Paulina, Grzanka Dariusz

机构信息

Department of Clinical Pathomorphology, Faculty of Medicine, Collegium Medicum in Bydgoszcz, Nicolaus Copernicus University in Torun, 85-094 Bydgoszcz, Poland.

出版信息

Biomedicines. 2023 Jan 24;11(2):326. doi: 10.3390/biomedicines11020326.

Abstract

Matrin 3 (MATR3) is one of the most abundant inner nuclear matrix proteins involved in multiple nuclear processes. However, to date, the biological role and prognostic relevance of MATR3 in human cancers still need to be explored. Therefore, the present study aimed to examine the expression levels and prognostic significance of MATR3 in clear cell renal cell carcinoma (ccRCC) patients. We assessed MATR3 immunohistochemical staining and RNA-seq data from publicly available data sets, and the results were analyzed with reference to clinicopathological characteristics and the overall survival of patients. Furthermore, the protein-protein interaction (PPI) network for and its neighbors was constructed, functionally annotated, and screened for survival-related genes. MATR3 protein and mRNA levels were lower in tumor tissues compared to control tissues. Lower MATR3 protein (HR 2.36, 95%CI 1.41-3.97; = 0.001) and mRNA (HR 2.01, 95%CI 1.46-2.75; < 0.0001) expression levels were found to be a significant independent adverse prognostic factor for the patient's overall survival (OS). Moreover, of the candidate genes, the gene was identified as being the most predictive of OS, and combined expression status predicted patient survival better than looking at each marker individually (HR 3.15, 95%CI 2.05-4.83; < 0.0001). In conclusion, the results from the present investigation warrant further research into the biological and prognostic value of MATR3 and MRPL23 in ccRCC patients.

摘要

Matrin 3(MATR3)是参与多种核过程的最丰富的核内基质蛋白之一。然而,迄今为止,MATR3在人类癌症中的生物学作用和预后相关性仍有待探索。因此,本研究旨在检测MATR3在透明细胞肾细胞癌(ccRCC)患者中的表达水平及其预后意义。我们评估了来自公开可用数据集的MATR3免疫组织化学染色和RNA测序数据,并结合患者的临床病理特征和总生存期对结果进行了分析。此外,构建了MATR3及其邻近蛋白的蛋白质-蛋白质相互作用(PPI)网络,进行了功能注释,并筛选了与生存相关的基因。与对照组织相比,肿瘤组织中MATR3蛋白和mRNA水平较低。较低的MATR3蛋白(HR 2.36,95%CI 1.41-3.97;P = 0.001)和mRNA(HR 2.01,95%CI 1.46-2.75;P < 0.0001)表达水平被发现是患者总生存期(OS)的一个显著独立不良预后因素。此外,在候选基因中,MRPL23基因被确定为对OS最具预测性的基因,联合MRPL23表达状态预测患者生存情况比单独查看每个标志物更好(HR 3.15,95%CI 2.05-4.83;P < 0.0001)。总之,本研究结果值得进一步研究MATR3和MRPL23在ccRCC患者中的生物学和预后价值。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f0f9/9952985/662879dc2a5e/biomedicines-11-00326-g001.jpg

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