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鉴定与巴德-毕德氏综合征相关的基因变异在巴基斯坦近亲家族中的谱。

Delineating the Spectrum of Genetic Variants Associated with Bardet-Biedl Syndrome in Consanguineous Pakistani Pedigrees.

机构信息

Molecular Biology and Genetics Department, Medical Research Center, Liaquat University of Medical and Health Sciences, Jamshoro 76090, Pakistan.

Institute of Basic Medical Sciences, Khyber Medical University, Peshawar 25100, Pakistan.

出版信息

Genes (Basel). 2023 Feb 3;14(2):404. doi: 10.3390/genes14020404.

DOI:10.3390/genes14020404
PMID:36833331
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9956862/
Abstract

This study aimed to find the molecular basis of Bardet-Biedl syndrome (BBS) in Pakistani consanguineous families. A total of 12 affected families were enrolled. Clinical investigations were performed to access the BBS-associated phenotypes. Whole exome sequencing was conducted on one affected individual from each family. The computational functional analysis predicted the variants' pathogenic effects and modeled the mutated proteins. Whole-exome sequencing revealed 9 pathogenic variants in six genes associated with BBS in 12 families. The was the most common BBS causative gene identified in five families (5/12, 41.6%), with one novel (c.1226G>A, p.Gly409Glu) and two reported variants. c.774G>A, Thr259LeuTer21 was the most frequent allele in three families 3/5 (60%). Two variants, c.223C>T, p.Arg75Ter and a novel, c. 252delA, p.Lys85STer39 were detected in the gene. A novel 8bp deletion c.387_394delAAATAAAA, p. Asn130GlyfsTer3 was found in gene. Three known variants were detected in , and genes. Identification of novel likely pathogenic variants in three genes reaffirms the allelic and genetic heterogeneity of BBS in Pakistani patients. The clinical differences among patients carrying the same pathogenic variant may be due to other factors influencing the phenotype, including variants in other modifier genes.

摘要

本研究旨在寻找巴基斯坦近亲家庭中 Bardet-Biedl 综合征 (BBS) 的分子基础。共纳入 12 个受影响的家庭。进行临床调查以评估与 BBS 相关的表型。对每个家庭的一个受影响个体进行全外显子组测序。计算功能分析预测了变体的致病效应,并对突变蛋白进行建模。全外显子组测序在 12 个家庭的 6 个与 BBS 相关的基因中发现了 9 个致病性变体。 是在五个家庭(5/12,41.6%)中发现的最常见的 BBS 致病基因,其中一个是新的(c.1226G>A,p.Gly409Glu)和两个报道的变体。c.774G>A,Thr259LeuTer21 是三个家庭(3/5,60%)中最常见的 等位基因。在 基因中检测到两个变体,c.223C>T,p.Arg75Ter 和一个新的,c. 252delA,p.Lys85STer39。在 基因中发现了一个新的 8bp 缺失 c.387_394delAAATAAAA,p. Asn130GlyfsTer3。在 、 和 基因中检测到三个已知的变体。在三个基因中鉴定出新的可能致病变体进一步证实了巴基斯坦患者中 BBS 的等位基因和遗传异质性。携带相同致病变体的患者之间的临床差异可能是由于其他影响表型的因素,包括其他修饰基因中的变体。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83ef/9956862/238926ab34ea/genes-14-00404-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83ef/9956862/cb228077a9e0/genes-14-00404-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83ef/9956862/e4950733f601/genes-14-00404-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83ef/9956862/238926ab34ea/genes-14-00404-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83ef/9956862/cb228077a9e0/genes-14-00404-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83ef/9956862/e4950733f601/genes-14-00404-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83ef/9956862/238926ab34ea/genes-14-00404-g003.jpg

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