Contreras Julia, Ruiz-Blanco Óscar, Dominique Carine, Humbert Odile, Henry Yves, Henras Anthony K, de la Cruz Jesús, Villalobo Eduardo
Instituto de Biomedicina de Sevilla, Hospital Universitario Virgen del Rocío/CSIC/Universidad de Sevilla, 41013 Seville, Spain.
Departamento de Genética, Facultad de Biología, Universidad de Sevilla, 41004 Seville, Spain.
Int J Mol Sci. 2023 Feb 9;24(4):3460. doi: 10.3390/ijms24043460.
Ribosome synthesis is a complex process that involves a large set of protein -acting factors, among them DEx(D/H)-box helicases. These are enzymes that carry out remodelling activities onto RNAs by hydrolysing ATP. The nucleolar DEGD-box protein Dbp7 is required for the biogenesis of large 60S ribosomal subunits. Recently, we have shown that Dbp7 is an RNA helicase that regulates the dynamic base-pairing between the snR190 small nucleolar RNA and the precursors of the ribosomal RNA within early pre-60S ribosomal particles. As the rest of DEx(D/H)-box proteins, Dbp7 has a modular organization formed by a helicase core region, which contains conserved motifs, and variable, non-conserved N- and C-terminal extensions. The role of these extensions remains unknown. Herein, we show that the N-terminal domain of Dbp7 is necessary for efficient nuclear import of the protein. Indeed, a basic bipartite nuclear localization signal (NLS) could be identified in its N-terminal domain. Removal of this putative NLS impairs, but does not abolish, Dbp7 nuclear import. Both N- and C-terminal domains are required for normal growth and 60S ribosomal subunit synthesis. Furthermore, we have studied the role of these domains in the association of Dbp7 with pre-ribosomal particles. Altogether, our results show that the N- and C-terminal domains of Dbp7 are important for the optimal function of this protein during ribosome biogenesis.
核糖体合成是一个复杂的过程,涉及大量蛋白质作用因子,其中包括DEx(D/H)-box解旋酶。这些酶通过水解ATP对RNA进行重塑活动。核仁DEGD-box蛋白Dbp7是大的60S核糖体亚基生物合成所必需的。最近,我们发现Dbp7是一种RNA解旋酶,它调节早期前60S核糖体颗粒中snR190小核仁RNA与核糖体RNA前体之间的动态碱基配对。与其他DEx(D/H)-box蛋白一样,Dbp7具有模块化结构,由一个包含保守基序的解旋酶核心区域以及可变的、非保守的N端和C端延伸组成。这些延伸的作用仍然未知。在此,我们表明Dbp7的N端结构域是该蛋白有效核输入所必需的。实际上,在其N端结构域中可以鉴定出一个碱性双分核定位信号(NLS)。去除这个假定的NLS会损害但不会消除Dbp7的核输入。N端和C端结构域对于正常生长和60S核糖体亚基合成都是必需的。此外,我们研究了这些结构域在Dbp7与核糖体前体颗粒结合中的作用。总之,我们的结果表明,Dbp7的N端和C端结构域对于该蛋白在核糖体生物合成过程中的最佳功能很重要。