Division of Pure and Applied Biochemistry, Center for Applied Life Science, Department of Chemistry, Lund University, 22100 Lund, Sweden.
Division of Biophysical Chemistry, Center for Molecular Protein Science, Department of Chemistry, Lund University, 22100 Lund, Sweden.
Int J Mol Sci. 2023 Feb 16;24(4):3973. doi: 10.3390/ijms24043973.
Plant hemoglobins, often referred to as phytoglobins, play important roles in abiotic stress tolerance. Several essential small physiological metabolites can be bound to these heme proteins. In addition, phytoglobins can catalyze a range of different oxidative reactions in vivo. These proteins are often oligomeric, but the degree and relevance of subunit interactions are largely unknown. In this study, we delineate which residues are involved in dimer formation of a sugar beet phytoglobin type 1.2 (BvPgb1.2) using NMR relaxation experiments. cells harboring a phytoglobin expression vector were cultivated in isotope-labeled (H, C and N) M9 medium. The triple-labeled protein was purified to homogeneity using two chromatographic steps. Two forms of BvPgb1.2 were examined, the oxy-form and the more stable cyanide-form. Using three-dimensional triple-resonance NMR experiments, sequence-specific assignments for CN-bound BvPgb1.2 were achieved for 137 backbone amide cross-peaks in the H-N TROSY spectrum, which amounts to 83% of the total number of 165 expected cross-peaks. A large proportion of the non-assigned residues are located in α-helixes G and H, which are proposed to be involved in protein dimerization. Such knowledge around dimer formation will be instrumental for developing a better understanding of phytoglobins' roles in planta.
植物血红蛋白,通常被称为植物球蛋白,在非生物胁迫耐受中发挥重要作用。一些必需的小分子生理代谢物可以与这些血红素蛋白结合。此外,植物球蛋白可以在体内催化一系列不同的氧化反应。这些蛋白质通常是寡聚的,但亚基相互作用的程度和相关性在很大程度上是未知的。在这项研究中,我们使用 NMR 弛豫实验描绘了甜菜 1.2 型植物球蛋白(BvPgb1.2)形成二聚体的哪些残基参与其中。使用同位素标记(H、C 和 N)M9 培养基培养含有植物球蛋白表达载体的 细胞。使用两种色谱步骤将三重标记的蛋白质纯化为均一形式。研究了两种形式的 BvPgb1.2,即氧合形式和更稳定的氰化物形式。使用三维三重共振 NMR 实验,在 H-N TROSY 光谱中为 CN 结合的 BvPgb1.2 实现了 137 个骨架酰胺交叉峰的序列特异性分配,这相当于预期的 165 个交叉峰总数的 83%。大量未分配的残基位于α-螺旋 G 和 H 中,这些残基被认为参与蛋白质二聚化。这种关于二聚体形成的知识对于深入了解植物球蛋白在植物中的作用至关重要。