• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

来自 ssp.. 的植物血球蛋白 BvPgb1.2 的构象动力学。

Conformational Dynamics of Phytoglobin BvPgb1.2 from ssp. .

机构信息

Division of Pure and Applied Biochemistry, Center for Applied Life Science, Department of Chemistry, Lund University, 22100 Lund, Sweden.

Division of Biophysical Chemistry, Center for Molecular Protein Science, Department of Chemistry, Lund University, 22100 Lund, Sweden.

出版信息

Int J Mol Sci. 2023 Feb 16;24(4):3973. doi: 10.3390/ijms24043973.

DOI:10.3390/ijms24043973
PMID:36835381
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9961634/
Abstract

Plant hemoglobins, often referred to as phytoglobins, play important roles in abiotic stress tolerance. Several essential small physiological metabolites can be bound to these heme proteins. In addition, phytoglobins can catalyze a range of different oxidative reactions in vivo. These proteins are often oligomeric, but the degree and relevance of subunit interactions are largely unknown. In this study, we delineate which residues are involved in dimer formation of a sugar beet phytoglobin type 1.2 (BvPgb1.2) using NMR relaxation experiments. cells harboring a phytoglobin expression vector were cultivated in isotope-labeled (H, C and N) M9 medium. The triple-labeled protein was purified to homogeneity using two chromatographic steps. Two forms of BvPgb1.2 were examined, the oxy-form and the more stable cyanide-form. Using three-dimensional triple-resonance NMR experiments, sequence-specific assignments for CN-bound BvPgb1.2 were achieved for 137 backbone amide cross-peaks in the H-N TROSY spectrum, which amounts to 83% of the total number of 165 expected cross-peaks. A large proportion of the non-assigned residues are located in α-helixes G and H, which are proposed to be involved in protein dimerization. Such knowledge around dimer formation will be instrumental for developing a better understanding of phytoglobins' roles in planta.

摘要

植物血红蛋白,通常被称为植物球蛋白,在非生物胁迫耐受中发挥重要作用。一些必需的小分子生理代谢物可以与这些血红素蛋白结合。此外,植物球蛋白可以在体内催化一系列不同的氧化反应。这些蛋白质通常是寡聚的,但亚基相互作用的程度和相关性在很大程度上是未知的。在这项研究中,我们使用 NMR 弛豫实验描绘了甜菜 1.2 型植物球蛋白(BvPgb1.2)形成二聚体的哪些残基参与其中。使用同位素标记(H、C 和 N)M9 培养基培养含有植物球蛋白表达载体的 细胞。使用两种色谱步骤将三重标记的蛋白质纯化为均一形式。研究了两种形式的 BvPgb1.2,即氧合形式和更稳定的氰化物形式。使用三维三重共振 NMR 实验,在 H-N TROSY 光谱中为 CN 结合的 BvPgb1.2 实现了 137 个骨架酰胺交叉峰的序列特异性分配,这相当于预期的 165 个交叉峰总数的 83%。大量未分配的残基位于α-螺旋 G 和 H 中,这些残基被认为参与蛋白质二聚化。这种关于二聚体形成的知识对于深入了解植物球蛋白在植物中的作用至关重要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ad11/9961634/e0b36f535ccc/ijms-24-03973-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ad11/9961634/1b4ef61b32bb/ijms-24-03973-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ad11/9961634/42534039bf00/ijms-24-03973-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ad11/9961634/e0b36f535ccc/ijms-24-03973-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ad11/9961634/1b4ef61b32bb/ijms-24-03973-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ad11/9961634/42534039bf00/ijms-24-03973-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ad11/9961634/e0b36f535ccc/ijms-24-03973-g003.jpg

相似文献

1
Conformational Dynamics of Phytoglobin BvPgb1.2 from ssp. .来自 ssp.. 的植物血球蛋白 BvPgb1.2 的构象动力学。
Int J Mol Sci. 2023 Feb 16;24(4):3973. doi: 10.3390/ijms24043973.
2
Oxidative Implications of Substituting a Conserved Cysteine Residue in Sugar Beet Phytoglobin BvPgb 1.2.替换甜菜植物血红蛋白BvPgb 1.2中一个保守半胱氨酸残基的氧化影响
Antioxidants (Basel). 2022 Aug 20;11(8):1615. doi: 10.3390/antiox11081615.
3
Extension of transverse relaxation-optimized spectroscopy techniques to allosteric proteins: CO- and paramagnetic fluoromet-hemoglobin [beta (15N-valine)].横向弛豫优化光谱技术在变构蛋白中的扩展:一氧化碳和顺磁性氟代高铁血红蛋白[β(15N-缬氨酸)]
Proc Natl Acad Sci U S A. 2000 Mar 14;97(6):2538-43. doi: 10.1073/pnas.97.6.2538.
4
Differential expression patterns of non-symbiotic hemoglobins in sugar beet (Beta vulgaris ssp. vulgaris).甜菜(Beta vulgaris ssp. vulgaris)中非共生血红蛋白的差异表达模式
Plant Cell Physiol. 2014 Apr;55(4):834-44. doi: 10.1093/pcp/pcu027. Epub 2014 Jan 30.
5
Subunit-specific backbone NMR assignments of a 64 kDa trp repressor/DNA complex: a role for N-terminal residues in tandem binding.一个64 kDa色氨酸阻遏物/DNA复合物的亚基特异性主链核磁共振归属:N端残基在串联结合中的作用
J Biomol NMR. 1998 Apr;11(3):307-18. doi: 10.1023/a:1008257803130.
6
1H, 15N, 13C and 13CO assignments and secondary structure determination of basic fibroblast growth factor using 3D heteronuclear NMR spectroscopy.利用三维异核核磁共振光谱法对碱性成纤维细胞生长因子进行¹H、¹⁵N、¹³C和¹³CO归属及二级结构测定。
J Biomol NMR. 1995 Nov;6(3):245-54. doi: 10.1007/BF00197806.
7
Chain-selective isotopic labeling for NMR studies of large multimeric proteins: application to hemoglobin.用于大型多聚体蛋白质核磁共振研究的链选择性同位素标记:在血红蛋白中的应用
Biophys J. 2000 Aug;79(2):1146-54. doi: 10.1016/S0006-3495(00)76368-5.
8
Sugar beet M14 glyoxalase I gene can enhance plant tolerance to abiotic stresses.糖甜菜 M14 甘油醛-3-磷酸脱氢酶 I 基因可增强植物对非生物胁迫的耐受性。
J Plant Res. 2013 May;126(3):415-25. doi: 10.1007/s10265-012-0532-4. Epub 2012 Dec 1.
9
NMR investigation of the dynamics of tryptophan side-chains in hemoglobins.血红蛋白中色氨酸侧链动力学的核磁共振研究。
J Mol Biol. 2002 Aug 30;321(5):863-78. doi: 10.1016/s0022-2836(02)00704-0.
10
BvCOLD1: A novel aquaporin from sugar beet (Beta vulgaris L.) involved in boron homeostasis and abiotic stress.BvCOLD1:一种新型水通道蛋白,来自于甜菜(Beta vulgaris L.),参与硼稳态和非生物胁迫。
Plant Cell Environ. 2018 Dec;41(12):2844-2857. doi: 10.1111/pce.13416. Epub 2018 Sep 12.

引用本文的文献

1
Gas-Binding Studies of Class 1 Sugar Beet Phytoglobin and C86A Mutant Using Isothermal Spectral Shifts in High-Precision Microliter Assay.利用高精度微升测定中的等温光谱位移对1类甜菜植物血红蛋白和C86A突变体进行气体结合研究。
Int J Mol Sci. 2025 Aug 25;26(17):8240. doi: 10.3390/ijms26178240.

本文引用的文献

1
Oxidative Implications of Substituting a Conserved Cysteine Residue in Sugar Beet Phytoglobin BvPgb 1.2.替换甜菜植物血红蛋白BvPgb 1.2中一个保守半胱氨酸残基的氧化影响
Antioxidants (Basel). 2022 Aug 20;11(8):1615. doi: 10.3390/antiox11081615.
2
Structural Insights into the Heme Pocket and Oligomeric State of Non-Symbiotic Hemoglobins from .从. 中获得非共生血红蛋白的血红素口袋和寡聚状态的结构见解。
Biomolecules. 2020 Nov 29;10(12):1615. doi: 10.3390/biom10121615.
3
Sugar beet hemoglobins: reactions with nitric oxide and nitrite reveal differential roles for nitrogen metabolism.
甜菜血红蛋白:与一氧化氮和亚硝酸盐的反应揭示了氮代谢的不同作用。
Biochem J. 2019 Jul 31;476(14):2111-2125. doi: 10.1042/BCJ20190154.
4
Deuterium induces a distinctive proteome that correlates with the reduction in growth rate.氘诱导出一种独特的蛋白质组,与生长速率的降低相关。
J Biol Chem. 2019 Feb 15;294(7):2279-2292. doi: 10.1074/jbc.RA118.006914. Epub 2018 Dec 13.
5
Redox control and autoxidation of class 1, 2 and 3 phytoglobins from Arabidopsis thaliana.拟南芥类 1、2 和 3 质体蓝素的氧化还原调控和自动氧化。
Sci Rep. 2018 Sep 12;8(1):13714. doi: 10.1038/s41598-018-31922-4.
6
Dynamics of dehaloperoxidase-hemoglobin A derived from NMR relaxation spectroscopy and molecular dynamics simulation.从 NMR 弛豫光谱和分子动力学模拟看脱卤过氧化物酶-血红蛋白 A 的动力学。
J Inorg Biochem. 2018 Apr;181:65-73. doi: 10.1016/j.jinorgbio.2018.01.006. Epub 2018 Jan 12.
7
NMRbox: A Resource for Biomolecular NMR Computation.NMRbox:生物分子核磁共振计算资源
Biophys J. 2017 Apr 25;112(8):1529-1534. doi: 10.1016/j.bpj.2017.03.011.
8
Effects of Overexpression of and Hemoglobin Genes on the Seed Oil Content of .[具体基因名称]和血红蛋白基因过表达对[具体植物名称]种子油含量的影响。
Front Plant Sci. 2017 Jan 9;7:2032. doi: 10.3389/fpls.2016.02032. eCollection 2016.
9
Role of Reversible Histidine Coordination in Hydroxylamine Reduction by Plant Hemoglobins (Phytoglobins).可逆组氨酸配位在植物血红蛋白(植物球蛋白)还原羟胺中的作用
Biochemistry. 2016 Oct 18;55(41):5809-5817. doi: 10.1021/acs.biochem.6b00775. Epub 2016 Oct 5.
10
Phytoglobin: a novel nomenclature for plant globins accepted by the globin community at the 2014 XVIII conference on Oxygen-Binding and Sensing Proteins.植物血红蛋白:在2014年第十八届氧结合与传感蛋白会议上被血红蛋白学界认可的植物球蛋白新命名。
F1000Res. 2016 Feb 24;5:212. doi: 10.12688/f1000research.8133.1. eCollection 2016.