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通过结构导向的合理设计提高 CYP154C2 对甾体的 2α-羟化效率。

Improved 2α-Hydroxylation Efficiency of Steroids by CYP154C2 Using Structure-Guided Rational Design.

机构信息

College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou, China.

Research Center for Clinical Pharmacy, The First Affiliated Hospital & Institute of Pharmaceutical Biotechnology, School of Medicine, Zhejiang University, Hangzhou, China.

出版信息

Appl Environ Microbiol. 2023 Mar 29;89(3):e0218622. doi: 10.1128/aem.02186-22. Epub 2023 Feb 27.

Abstract

Cytochrome P450 enzymes are promising biocatalysts for industrial use because they catalyze site-selective C-H oxidation and have diverse catalytic reactions and a broad substrate range. In this study, the 2α-hydroxylation activity of CYP154C2 from Streptomyces avermitilis MA-4680T toward androstenedione (ASD) was identified by an conversion assay. The testosterone (TES)-bound structure of CYP154C2 was solved at 1.42 Å, and this structure was used to design eight mutants, including single, double, and triple mutants, to improve the conversion efficiency. Mutants L88F/M191F and M191F/V285L were found to enhance the conversion rates significantly (i.e., 8.9-fold and 7.4-fold for TES, 46.5-fold and 19.5-fold for ASD, respectively) compared with the wild-type (WT) enzyme while retaining high 2α-position selectivity. The substrate binding affinity of the L88F/M191F mutant toward TES and ASD was enhanced compared with that of WT CYP154C2, supporting the measured increase in the conversion efficiencies. Moreover, the total turnover number and / of the L88F/M191F and M191F/V285L mutants increased significantly. Interestingly, all mutants containing L88F generated 16α-hydroxylation products, suggesting that L88 in CYP154C2 plays a vital role in substrate selectivity and that the amino acid corresponding to L88 in the 154C subfamily affects the orientation of steroid binding and substrate selectivity. Hydroxylated derivatives of steroids play essential roles in medicine. Cytochrome P450 enzymes selectively hydroxylate methyne groups on steroids, which can dramatically change their polarity, biological activity and toxicity. There is a paucity of reports on the 2α-hydroxylation of steroids, and documented 2α-hydroxylate P450s show extremely low conversion efficiency and/or low regio- and stereoselectivity. This study conducted crystal structure analysis and structure-guided rational engineering of CYP154C2 and efficiently enhanced the conversion efficiency of TES and ASD with high regio- and stereoselectivity. Our results provide an effective strategy and theoretical basis for the 2α-hydroxylation of steroids, and the structure-guided rational design of P450s should facilitate P450 applications in the biosynthesis of steroid drugs.

摘要

细胞色素 P450 酶是一种很有前途的工业用生物催化剂,因为它们可以催化位点选择性的 C-H 氧化,并且具有多种催化反应和广泛的底物范围。在这项研究中,通过转化测定鉴定了来自链霉菌属 avermitilis MA-4680T 的 CYP154C2 对雄烯二酮(ASD)的 2α-羟化活性。CYP154C2 与睾丸酮(TES)结合的结构在 1.42Å 处得到解决,该结构被用于设计 8 个突变体,包括单突变体、双突变体和三突变体,以提高转化效率。发现突变体 L88F/M191F 和 M191F/V285L 显著提高了转化率(即 TES 为 8.9 倍,ASD 为 46.5 倍),与野生型(WT)酶相比,同时保持了高 2α-位选择性。与 WT CYP154C2 相比,L88F/M191F 突变体对 TES 和 ASD 的底物结合亲和力增强,支持转化率的提高。此外,L88F/M191F 和 M191F/V285L 突变体的总周转率和 / 显著增加。有趣的是,所有包含 L88F 的突变体都产生了 16α-羟化产物,这表明 CYP154C2 中的 L88 在底物选择性中起着至关重要的作用,并且 154C 亚家族中对应于 L88 的氨基酸会影响甾体结合的方向和底物选择性。 甾体的羟基化衍生物在医学中起着重要作用。细胞色素 P450 酶选择性地羟化甾体上的亚甲基,这可以极大地改变它们的极性、生物活性和毒性。关于甾体的 2α-羟化的报道很少,并且有报道的 2α-羟化 P450 酶的转化率极低,或者区域和立体选择性低。本研究通过晶体结构分析和 CYP154C2 的结构导向合理工程改造,以高区域和立体选择性有效地提高了 TES 和 ASD 的转化率。我们的结果为甾体的 2α-羟化提供了一种有效的策略和理论基础,并且 P450 的结构导向合理设计应该有助于 P450 在甾体药物生物合成中的应用。

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