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具有催化自足性的CYP116B5:用于提高单加氧酶活性的结构域转换

Catalytically self-sufficient CYP116B5: Domain switch for improved peroxygenase activity.

作者信息

Correddu Danilo, Catucci Gianluca, Giuriato Daniele, Di Nardo Giovanna, Ciaramella Alberto, Gilardi Gianfranco

机构信息

Department of Life Sciences and Systems Biology, University of Torino, Torino, Italy.

HuvePharma Italia, Garessio, Italy.

出版信息

Biotechnol J. 2023 May;18(5):e2200622. doi: 10.1002/biot.202200622. Epub 2023 Mar 10.

Abstract

Self-sufficient cytochromes P450 of the sub-family CYP116B have gained great attention in biotechnology due to their ability to catalyze challenging reactions toward a wide range of organic compounds. However, these P450s are often unstable in solution and their activity is limited to a short reaction time. Previously it has been shown that the isolated heme domain of CYP116B5 can work as a peroxygenase with H O without the addition of NAD(P)H. In this work, protein engineering was used to generate a chimeric enzyme (CYP116B5-SOX), in which the native reductase domain is replaced by a monomeric sarcosine oxidase (MSOX) capable of producing H O . The full-length enzyme (CYP116B5-fl) is characterized for the first time, allowing a detailed comparison to the heme domain (CYP116B5-hd) and CYP116B5-SOX. The catalytic activity of the three forms of the enzyme was studied using p-nitrophenol as substrate, and adding NADPH (CYP116B5-fl), H O (CYP116B5-hd), and sarcosine (CYP116B5-SOX) as source of electrons. CYP116B5-SOX performs better than CYP116B5-fl and CYP116B5-hd showing 10- and 3-folds higher activity, in terms of p-nitrocatechol produced per mg of enzyme per minute. CYP116B5-SOX represents an optimal model to exploit CYP116B5 and the same protein engineering approach could be used for P450s of the same class.

摘要

细胞色素P450亚家族CYP116B的自给自足型细胞色素因其能够催化针对多种有机化合物的具有挑战性的反应而在生物技术领域备受关注。然而,这些P450在溶液中通常不稳定,并且其活性仅限于较短的反应时间。此前已表明,CYP116B5的分离血红素结构域无需添加NAD(P)H即可作为过氧化物酶与H₂O₂作用。在这项工作中,通过蛋白质工程构建了一种嵌合酶(CYP116B5-SOX),其中天然还原酶结构域被能够产生H₂O₂的单体肌氨酸氧化酶(MSOX)所取代。首次对全长酶(CYP116B5-fl)进行了表征,以便与血红素结构域(CYP116B5-hd)和CYP116B5-SOX进行详细比较。以对硝基苯酚为底物,分别添加NADPH(CYP116B5-fl)、H₂O₂(CYP116B5-hd)和肌氨酸(CYP116B5-SOX)作为电子源,研究了这三种形式酶的催化活性。就每分钟每毫克酶产生的对硝基儿茶酚而言,CYP116B5-SOX的表现优于CYP116B5-fl和CYP116B5-hd,活性分别高10倍和3倍。CYP116B5-SOX是利用CYP116B5的最佳模型,相同的蛋白质工程方法可用于同一类别的P450。

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