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具有铜过渡金属前体的新型非中心对称化合物的单晶研究、 Hirshfeld表面分析、密度泛函理论研究、分子对接、物理化学表征及生物活性

Single Crystal Investigations, Hirshfeld Surface Analysis, DFT Studies, Molecular Docking, Physico-Chemical Characterization, and Biological Activity of a Novel Non-Centrosymmetric Compound with a Copper Transition Metal Precursor.

作者信息

Gannouni Afef, Tahri Wiem, Roisnel Thierry, Al-Resayes Saud I, Azam Mohammad, Kefi Riadh

机构信息

Laboratoire de Chimie des Matériaux, Faculté des Sciences de Bizerte, Université de Carthage Faculté des Sciences de Bizerte, 7021 Zarzouna, Tunisie.

Laboratory of Biochemistry and Molecular Biology, Faculty of Sciences, Risks Related to Environmental Stress, Struggle and Prevention (UR17ES20), University of Carthage, Te Ministry of Higher Education and Scientific Research, Zarzouna, 7003 Bizerte, Tunisia.

出版信息

ACS Omega. 2023 Feb 17;8(8):7738-7748. doi: 10.1021/acsomega.2c07389. eCollection 2023 Feb 28.

DOI:10.1021/acsomega.2c07389
PMID:36873014
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9979233/
Abstract

A novel organic-inorganic hybrid non-centrosymmetric superconductor material [2-ethylpiperazine tetrachlorocuprate(II)] has been synthesized and investigated by means of Fourier transform infrared spectroscopy, single-crystal X-ray crystallography, thermal analyses, and density functional theory (DFT) studies. The single-crystal X-ray analysis indicates that the studied compound crystallizes in the P222 orthorhombic space group. Hirshfeld surface analyses have been used to investigate non-covalent interactions. Organic cations [CHN] and inorganic moieties [CuCl] alternatively connect N-H···Cl and C-H···Cl hydrogen bonds. In addition, the energies of the frontier orbitals, highest occupied molecular orbital, lowest unoccupied molecular orbital, the reduced density gradient analyses and quantum theory of atoms in molecules analyses, and the natural bonding orbital are also studied. Furthermore, the optical absorption and photoluminescence properties were also explored. However, time-dependent/DFT computations were utilized to examine the photoluminescence and UV-vis absorption characteristics. Two different methods, 2, 2-diphenyl-1-picryhydrazyl radical and 2,2-azino-bis(3-ethylbenzothiazoline-6-sulfonic acid radical scavenging, were used to evaluate the antioxidant activity of the studied material. Furthermore, the title material was docked to the SARS-CoV-2 variant (B.1.1.529) in silico to study the non-covalent interaction of the cuprate(II) complex with active amino acids in the spike protein.

摘要

一种新型有机-无机杂化非中心对称超导材料[2-乙基哌嗪四氯铜酸盐(II)]已通过傅里叶变换红外光谱、单晶X射线晶体学、热分析和密度泛函理论(DFT)研究进行了合成和研究。单晶X射线分析表明,所研究的化合物结晶于P222正交空间群。Hirshfeld表面分析已用于研究非共价相互作用。有机阳离子[CHN]和无机部分[CuCl]交替连接N-H···Cl和C-H···Cl氢键。此外,还研究了前沿轨道的能量、最高占据分子轨道、最低未占据分子轨道、约化密度梯度分析和分子中原子的量子理论分析以及自然键轨道。此外,还探索了光吸收和光致发光特性。然而,利用含时/DFT计算来研究光致发光和紫外-可见吸收特性。使用两种不同的方法,即2,2-二苯基-1-苦基肼自由基和2,2-联氮-双(3-乙基苯并噻唑啉-6-磺酸)自由基清除法,来评估所研究材料的抗氧化活性。此外,将标题材料在计算机上对接至SARS-CoV-2变体(B.1.1.529),以研究铜酸盐(II)配合物与刺突蛋白中活性氨基酸的非共价相互作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/975b/9979233/55f27dcfad95/ao2c07389_0010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/975b/9979233/8ae59fe90c2a/ao2c07389_0002.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/975b/9979233/553f7d41ec5f/ao2c07389_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/975b/9979233/4649b6fd0b34/ao2c07389_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/975b/9979233/5596fd8fd7e3/ao2c07389_0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/975b/9979233/bee72e9b5a89/ao2c07389_0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/975b/9979233/444f2725d4de/ao2c07389_0008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/975b/9979233/8992bf096bad/ao2c07389_0009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/975b/9979233/55f27dcfad95/ao2c07389_0010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/975b/9979233/8ae59fe90c2a/ao2c07389_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/975b/9979233/397224566325/ao2c07389_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/975b/9979233/553f7d41ec5f/ao2c07389_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/975b/9979233/4649b6fd0b34/ao2c07389_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/975b/9979233/5596fd8fd7e3/ao2c07389_0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/975b/9979233/bee72e9b5a89/ao2c07389_0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/975b/9979233/444f2725d4de/ao2c07389_0008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/975b/9979233/8992bf096bad/ao2c07389_0009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/975b/9979233/55f27dcfad95/ao2c07389_0010.jpg

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