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噻唑甲酰胺衍生物作为COX抑制剂的设计、合成、分子对接研究及生物学评价

Design, synthesis, molecular docking studies and biological evaluation of thiazole carboxamide derivatives as COX inhibitors.

作者信息

Hawash Mohammed, Jaradat Nidal, Abualhasan Murad, Şüküroğlu Murat Kadır, Qaoud Mohammed T, Kahraman Deniz Cansen, Daraghmeh Heba, Maslamani Leen, Sawafta Mais, Ratrout Ala, Issa Linda

机构信息

Department of Pharmacy, Faculty of Medicine and Health Sciences, An-Najah National University, Nablus, Palestine.

Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Gazi University, Ankara, Turkey.

出版信息

BMC Chem. 2023 Mar 6;17(1):11. doi: 10.1186/s13065-023-00924-3.

Abstract

BACKGROUND

Nonsteroidal anti-inflammatory drugs (NSAIDs) have been the most commonly used class of medications worldwide for the last three decades.

OBJECTIVES

This study aimed to design and synthesize a novel series of methoxyphenyl thiazole carboxamide derivatives and evaluate their cyclooxygenase (COX) suppressant and cytotoxic properties.

METHODS

The synthesized compounds were characterized using H, C-NMR, IR, and HRMS spectrum analysis and were evaluated for their selectivity towards COX-1 and COX-2 using an in vitro COX inhibition assay kit. Besides, their cytotoxicity was evaluated using the Sulforhodamine B (SRB) assay. Moreover, molecular docking studies were conducted to identify the possible binding patterns of these compounds within both COX-1 and COX-2 isozymes, utilizing human X-ray crystal structures. The density functional theory (DFT) analysis was used to evaluate compound chemical reactivity, which was determined by calculating the frontier orbital energy of both HOMO and LUMO orbitals, as well as the HOMO-LUMO energy gap. Finally, the QiKProp module was used for ADME-T analysis.

RESULTS

The results revealed that all synthesized molecules have potent inhibitory activities against COX enzymes. The percentage of inhibitory activities at 5 µM concentration against the COX2 enzyme was in the range of 53.9-81.5%, while the percentage against the COX-1 enzyme was 14.7-74.8%. That means almost all of our compounds have selective inhibition activities against the COX-2 enzyme, and the most selective compound was 2f, with selectivity ratio (SR) value of 3.67 at 5 µM concentration, which has a bulky group of trimethoxy on the phenyl ring that could not bind well with the COX-1 enzyme. Compound 2h was the most potent, with an inhibitory activity percentage at 5 µM concentration of 81.5 and 58.2% against COX-2 and COX-1, respectively. The cytotoxicity of these compounds was evaluated against three cancer cell lines: Huh7, MCF-7, and HCT116, and negligible or very weak activities were observed for all of these compounds except compound 2f, which showed moderate activities with IC values of 17.47 and 14.57 µM against Huh7 and HCT116 cancer cell lines, respectively. Analysis of the molecular docking suggests 2d, 2e, 2f, and 2i molecules were bound to COX-2 isozyme favorably over COX-1 enzyme, and their interaction behaviors within COX-1 and COX-2 isozymes were comparable to celecoxib, as an ideal selective COX-2 drug, which explained their high potency and COX-2 selectivity. The molecular docking scores and expected affinity using the MM-GBSA approach were consistent with the recorded biological activity. The calculated global reactivity descriptors, such as HOMO and LUMO energies and the HOMO-LUMO gaps, confirmed the key structural features required to achieve favorable binding interactions and thus improve affinity. The in silico ADME-T studies asserted the druggability of molecules and have the potential to become lead molecules in the drug discovery process.

CONCLUSION

In general, the series of the synthesized compounds had a strong effect on both enzymes (COX-1 and COX-2) and the trimethoxy compound 2f was more selective than the other compounds.

摘要

背景

在过去三十年里,非甾体抗炎药(NSAIDs)一直是全球最常用的一类药物。

目的

本研究旨在设计并合成一系列新型甲氧基苯基噻唑甲酰胺衍生物,并评估它们对环氧化酶(COX)的抑制活性和细胞毒性。

方法

通过氢谱、碳谱、红外光谱和高分辨质谱对合成的化合物进行表征,并使用体外COX抑制检测试剂盒评估它们对COX-1和COX-2的选择性。此外,使用磺酰罗丹明B(SRB)检测法评估它们的细胞毒性。利用人X射线晶体结构,进行分子对接研究以确定这些化合物在COX-1和COX-2同工酶中的可能结合模式。采用密度泛函理论(DFT)分析评估化合物的化学反应性,通过计算最高占据分子轨道(HOMO)和最低未占据分子轨道(LUMO)的前沿轨道能量以及HOMO-LUMO能隙来确定。最后,使用QiKProp模块进行药物代谢动力学-药物性质(ADME-T)分析。

结果

结果表明,所有合成分子对COX酶均具有强效抑制活性。在5 μM浓度下,对COX-2酶的抑制活性百分比在53.9%至81.5%之间,而对COX-1酶的抑制活性百分比为14.7%至74.8%。这意味着几乎所有化合物对COX-2酶都具有选择性抑制活性,最具选择性的化合物是2f,在5 μM浓度下的选择性比率(SR)值为3.67,其苯环上有一个庞大的三甲氧基基团,与COX-1酶结合不佳。化合物2h活性最强,在5 μM浓度下对COX-2和COX-1的抑制活性百分比分别为81.5%和58.2%。评估了这些化合物对三种癌细胞系(Huh7、MCF-7和HCT116)的细胞毒性,除化合物2f外,所有这些化合物的活性均可忽略不计或非常弱,化合物2f对Huh7和HCT116癌细胞系表现出中等活性,IC值分别为17.47和14.57 μM。分子对接分析表明,2d、2e、2f和2i分子与COX-2同工酶的结合优于COX-1酶,它们在COX-1和COX-2同工酶中的相互作用行为与作为理想选择性COX-药物的塞来昔布相当,这解释了它们的高效性和对COX-2的选择性。使用MM-GBSA方法计算的分子对接分数和预期亲和力与记录的生物活性一致。计算得到的全局反应性描述符,如HOMO和LUMO能量以及HOMO-LUMO能隙,证实了实现良好结合相互作用从而提高亲和力所需的关键结构特征。计算机辅助ADME-T研究表明这些分子具有成药潜力,有可能成为药物发现过程中的先导分子。

结论

总体而言,合成的一系列化合物对两种酶(COX-1和COX-2)均有强效作用,三甲氧基化合物2f比其他化合物更具选择性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cf60/9987136/0c4731c58a7b/13065_2023_924_Fig1_HTML.jpg

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