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从 的肠道中分离出的具有益生菌潜力的新型 的全基因组序列和特征。

Complete genome sequence and characterization of a novel with probiotic potential isolated from the gut of .

机构信息

Departamento de Ingeniería Celular y Biocatálisis, Instituto de Biotecnología, UNAM, Avenida Universidad 2001, Col. Chamilpa, 62420 Cuernavaca, Morelos, Mexico.

Departamento de Microbiología Molecular, Instituto de Biotecnología (IBT), Universidad Nacional Autónoma de México (UNAM) Av. Universidad #2001, Col. Chamilpa, Cuernavaca, Morelos 62210, Mexico.

出版信息

Microb Genom. 2023 Mar;9(3). doi: 10.1099/mgen.0.000938.

Abstract

the Pacific whiteleg shrimp, is one of the most marketable species in aquaculture worldwide. However, it is susceptible to different infections causing considerable losses in production each year. Consequently, using prebiotics that promotes the proliferation of beneficial bacteria and strengthen the immune system is a current strategy for disease control. In this study, we isolated two strains of from the gut of fed with agavin-supplemented diets. These isolates showed antibacterial activity against and , most likely due to peptidoglycan hydrolase (PGH) activity. Furthermore, we sequenced the genome of one isolate. As a result, we observed three proteins related to the production of bacteriocins, a relevant trait for selecting probiotic strains since they can inhibit the invasion of potential pathogens. Additionally, the genome annotation showed genes related to the production of essential nutrients for the host. It lacked two of the most common factors associated with virulence in pathogenic strains (esp and hyl). Thus, this host-probiotic-derived strain has potential application not only in shrimp health but also in alternative aquatic environments, as it is adapted to coexist within the gut shrimp microbiota, independently of the diet.

摘要

太平洋白对虾是世界水产养殖中最具市场价值的品种之一。然而,它易受不同感染的影响,每年都会造成相当大的产量损失。因此,使用促进有益细菌增殖和增强免疫系统的益生元是控制疾病的当前策略。在这项研究中,我们从投喂添加藻朊酸钠饲料的白对虾肠道中分离出两株 。这些分离株对 和 表现出抗菌活性,很可能是由于肽聚糖水解酶 (PGH) 活性。此外,我们对其中一个分离株的基因组进行了测序。结果,我们观察到与细菌素生产相关的三种蛋白质,这是选择益生菌菌株的一个重要特征,因为它们可以抑制潜在病原体的入侵。此外,基因组注释显示了与宿主生产必需营养素相关的基因。它缺乏与 致病性菌株中两种最常见的毒力相关因素(esp 和 hyl)。因此,这种源自宿主-益生菌的菌株不仅在虾类健康方面具有潜在应用,而且在替代水产养殖环境中也具有潜在应用,因为它能够适应与虾肠道微生物群共存,而不依赖于饮食。

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