Shukla Sharda, Nishanth Rao R, Bhuktar Harshavardhan, Edwin Rebecca Kristina, Jamma Trinath, Medishetti Raghavender, Banerjee Sharmistha, Giliyaru Varadaraj Bhat, Shenoy Gautham G, Oruganti Srinivas, Misra Parimal, Pal Manojit
Dr. Reddy's Institute of Life Sciences, University of Hyderabad Campus, Gachibowli, Hyderabad 500046, India; Manipal College of Pharmaceutical Sciences, Manipal Academy of Higher Education, Madhav Nagar, Manipal 576 104, Karnataka, India.
Dr. Reddy's Institute of Life Sciences, University of Hyderabad Campus, Gachibowli, Hyderabad 500046, India.
Bioorg Chem. 2023 May;134:106452. doi: 10.1016/j.bioorg.2023.106452. Epub 2023 Mar 2.
The enzyme chorismate mutase (or CM that is vital for the survival of bacteria) is an interesting pharmacological target for the identification of new anti-tubercular agents. The 5,5-disibstituted pyrazolo[4,3-d]pyrimidinone derivatives containing the fragment based on 4-amino-1-methyl-3-propyl-1H-pyrazole-5-carboxamide were designed and explored as the potential inhibitors of chorismate mutase. Based on encouraging docking results of two representative molecules evaluated in silico against MtbCM (PDB: 2FP2) the Wang resin catalysed sonochemical synthesis of target N-heteroarenes were undertaken. The methodology involved the reaction of 4-amino-1-methyl-3-propyl-1H-pyrazole-5-carboxamide with the appropriate cyclic/acyclic ketones to afford the desired products in acceptable (51-94%) yields. The methodology was also extended successfully towards the synthesis of 2,2-disubstituted 2,3-dihydroquinazolin-4(1H)-ones in excellent (85-90%) yields. In vitro MTT assay against the RAW 264.7 cell line followed by enzymatic assay against MtbCM identified 3b and 3c as active compounds that showed two H-bonding via their NH (at position 6) and CO group with MtbCM in silico and encouraging (54-57%) inhibition at 30 µM in vitro. Notably, none of the 2,2-disubstituted 2,3-dihydroquinazolin-4(1H)-ones showed any significant inhibition of MtbCM suggesting the favourable role of the pyrazole moiety in case of pyrazolo[4,3-d]pyrimidinones. The favourable role of cyclopentyl ring attached to the pyrazolo[4,3-d]pyrimidinone moiety and that of two methyl groups in place of cyclopentyl ring was also indicated by the SAR study. Besides showing effects against MtbCM in the concentration response study, 3b and 3c showed little or no effects on mammalian cell viability up to 100 µM in an MTT assay but decreased the % Mtb cell viability at 10-30 µM with > 20% decrease at 30 µM in an Alamar Blue Assay. Moreover, no adverse effects were noted for these compounds when tested for teratogenicity and hepatotoxicity in zebrafish at various concentrations. Overall, being the only example of MtbCM inhibitors that showed effects on Mtb cell viability the compound 3b and 3c are of further interest form the view point of discovery and development of new anti-tubercular agents.
分支酸变位酶(或CM,对细菌的生存至关重要)是鉴定新型抗结核药物的一个有趣的药理学靶点。设计并研究了含有基于4-氨基-1-甲基-3-丙基-1H-吡唑-5-甲酰胺片段的5,5-二取代吡唑并[4,3-d]嘧啶酮衍生物,作为分支酸变位酶的潜在抑制剂。基于两种代表性分子在计算机模拟中对结核分枝杆菌分支酸变位酶(PDB:2FP2)评估的令人鼓舞的对接结果,进行了王树脂催化的目标氮杂芳烃的声化学合成。该方法涉及4-氨基-1-甲基-3-丙基-1H-吡唑-5-甲酰胺与适当的环状/非环状酮反应,以可接受的产率(51-94%)得到所需产物。该方法还成功扩展到以优异的产率(85-90%)合成2,2-二取代的2,3-二氢喹唑啉-4(1H)-酮。对RAW 264.7细胞系进行体外MTT测定,随后对结核分枝杆菌分支酸变位酶进行酶活性测定,确定3b和3c为活性化合物,它们通过其NH(在第6位)和CO基团与结核分枝杆菌分支酸变位酶在计算机模拟中形成两个氢键,并在30μM体外显示出令人鼓舞的(54-57%)抑制作用。值得注意的是,2,2-二取代的2,3-二氢喹唑啉-4(1H)-酮均未显示出对结核分枝杆菌分支酸变位酶的任何显著抑制作用,这表明吡唑部分在吡唑并[4,3-d]嘧啶酮的情况下具有有利作用。构效关系研究还表明了连接到吡唑并[4,3-d]嘧啶酮部分的环戊基环以及两个甲基取代环戊基环的有利作用。除了在浓度响应研究中显示出对结核分枝杆菌分支酸变位酶的作用外,3b和3c在MTT测定中高达100μM时对哺乳动物细胞活力几乎没有影响,但在alamar蓝测定中在10-30μM时降低了结核分枝杆菌细胞活力百分比,在30μM时降低超过20%。此外,在不同浓度下对斑马鱼进行致畸性和肝毒性测试时,未观察到这些化合物有任何不良反应。总体而言,作为仅有的对结核分枝杆菌细胞活力有影响的结核分枝杆菌分支酸变位酶抑制剂的例子,从发现和开发新型抗结核药物的角度来看,化合物3b和3c更具吸引力。