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利用X射线为智能椰子分析系统开发非侵入式3D定量成像技术。

Developing non-invasive 3D quantificational imaging for intelligent coconut analysis system with X-ray.

作者信息

Zhang Yu, Liu Qianfan, Chen Jing, Sun Chengxu, Lin Shenghuang, Cao Hongxing, Xiao Zhaolin, Huang Mengxing

机构信息

School of Computer Science and Technology, Hainan University, Haikou, China.

Radiology department, Central South University Xiangya School of Medicine Affiliated Haikou Hospital, Haikou, China.

出版信息

Plant Methods. 2023 Mar 9;19(1):24. doi: 10.1186/s13007-023-01002-4.

Abstract

BACKGROUND

As one of the largest drupes in the world, the coconut has a special multilayered structure and a seed development process that is not yet fully understood. On the one hand, the special structure of the coconut pericarp prevents the development of external damage to the coconut fruit, and on the other hand, the thickness of the coconut shell makes it difficult to observe the development of bacteria inside it. In addition, coconut takes about 1 year to progress from pollination to maturity. During the long development process, coconut development is vulnerable to natural disasters, cold waves, typhoons, etc. Therefore, nondestructive observation of the internal development process remains a highly important and challenging task. In this study, We proposed an intelligent system for building a three-dimensional (3D) quantitative imaging model of coconut fruit using Computed Tomography (CT) images. Cross-sectional images of coconut fruit were obtained by spiral CT scanning. Then a point cloud model was built by extracting 3D coordinate data and RGB values. The point cloud model was denoised using the cluster denoising method. Finally, a 3D quantitative model of a coconut fruit was established.

RESULTS

The innovations of this work are as follows. 1) Using CT scans, we obtained a total of 37,950 non-destructive internal growth change maps of various types of coconuts to establish a coconut data set called "CCID", which provides powerful graphical data support for coconut research. 2) Based on this data set, we built a coconut intelligence system. By inputting a batch of coconut images into a 3D point cloud map, the internal structure information can be ascertained, the entire contour can be drawn and rendered according to need, and the long diameter, short diameter and volume of the required structure can be obtained. We maintained quantitative observation on a batch of local Hainan coconuts for more than 3 months. With 40 coconuts as test cases, the high accuracy of the model generated by the system is proven. The system has a good application value and broad popularization prospects in the cultivation and optimization of coconut fruit.

CONCLUSION

The evaluation results show that the 3D quantitative imaging model has high accuracy in capturing the internal development process of coconut fruits. The system can effectively assist growers in internal developmental observations and in structural data acquisition from coconut, thus providing decision-making support for improving the cultivation conditions of coconuts.

摘要

背景

椰子作为世界上最大的核果之一,具有特殊的多层结构,其种子发育过程尚未完全明确。一方面,椰子果皮的特殊结构可防止外界对椰子果实造成损伤;另一方面,椰壳的厚度使得难以观察其内部细菌的发育情况。此外,椰子从授粉到成熟大约需要1年时间。在漫长的发育过程中,椰子发育易受自然灾害、寒潮、台风等影响。因此,对其内部发育过程进行无损观测仍是一项极为重要且具有挑战性的任务。在本研究中,我们提出了一种利用计算机断层扫描(CT)图像构建椰子果实三维(3D)定量成像模型的智能系统。通过螺旋CT扫描获取椰子果实的横截面图像。然后通过提取三维坐标数据和RGB值构建点云模型。采用聚类去噪方法对该点云模型进行去噪处理。最终,建立了椰子果实的三维定量模型。

结果

本研究的创新点如下。1)利用CT扫描,我们总共获得了37950张各类椰子的无损内部生长变化图,建立了一个名为“CCID”的椰子数据集,为椰子研究提供了强大的图形数据支持。2)基于该数据集,我们构建了一个椰子智能系统。通过将一批椰子图像输入到三维点云图中,可以确定其内部结构信息,根据需要绘制并渲染整个轮廓,还可获取所需结构的长径、短径和体积。我们对一批海南本地椰子进行了3个多月的定量观测。以40个椰子作为测试案例,证明了该系统生成的模型具有很高的准确性。该系统在椰子果实的种植和优化方面具有良好的应用价值和广阔的推广前景。

结论

评估结果表明,三维定量成像模型在捕捉椰子果实内部发育过程方面具有较高的准确性。该系统能够有效地协助种植者进行内部发育观测以及获取椰子的结构数据,从而为改善椰子种植条件提供决策支持。

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