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埃博拉病毒诊断。

Diagnostics of Ebola virus.

机构信息

Laboratory of Virology, National Institute for Infectious Diseases Lazzaro Spallanzani (IRCCS), Rome, Italy.

出版信息

Front Public Health. 2023 Feb 23;11:1123024. doi: 10.3389/fpubh.2023.1123024. eCollection 2023.

Abstract

Ebola is a highly pathogenic virus, which in humans reaches a mortality rate above 50%. Due to a lack of laboratories in territories where Ebola viruses are endemic and the limited number of surveillance programmes, tests for the confirmation of suspected cases of Ebola are often performed in Reference Laboratories. While this provides guarantees regarding the accuracy of results, the shipment of samples to a centralized facility where the diagnostic test can be performed and the time required to achieve the results takes several days, which increases costs and entails delays in the isolation of positive subjects and therapeutic intervention with negative consequences both for patients and the community. Molecular tests have been the most frequently used tool in Ebola diagnosis in recent outbreaks. One of the most commonly used molecular tests is the Real-Star Altona, which targets a conserved area of the L gene. This assay showed different sensitivities depending on the Ebola virus: 471 copies/mL (EBOV) and 2871 copies/ml (SUDAN virus). The Cepheid system also showed good sensitivity (232 copies/mL). The LAMP platform is very promising because, being an isothermal reaction, it does not require high-precision instrumentation and can be considered a Point of Care (PoC) tool. Its analytical sensitivity is 1 copy/reaction. However, since data from real life studies are not yet available, it is premature to give any indications on its feasibility. Moreover, in November 2014, the WHO recommended the development of rapid diagnostic tests (RDT) according to ASSURED criteria. Several RDT assays have since been produced, most of which are rapid tests based on the search for antibody anti-Ebola viral proteins with immunochromatographic methods. Several viral antigens are used for this purpose: VP40, NP and GP. These assays show different sensitivities according to the protein used: VP40 57.4-93.1%, GP 53-88.9% and 85% for NP compared to reference molecular assays. From these results, it can be deduced that no RDT reaches the 99% sensitivity recommended by the WHO and therefore any RDT negative results in suspected cases should be confirmed with a molecular test.

摘要

埃博拉是一种高致病性病毒,在人类中其死亡率超过 50%。由于在埃博拉病毒流行的地区缺乏实验室,并且监测计划的数量有限,因此经常在参考实验室中对疑似埃博拉病例进行检测以确认。虽然这保证了结果的准确性,但将样本运送到可以进行诊断测试的集中设施,以及获得结果所需的时间需要数天,这增加了成本,并导致对阳性病例的隔离和对阴性病例的治疗干预延迟,这对患者和社区都有负面影响。分子测试是最近几次埃博拉疫情诊断中最常用的工具之一。最常用的分子测试之一是针对 L 基因保守区域的 Real-Star Altona。该测定法显示出针对不同埃博拉病毒的不同灵敏度:471 拷贝/毫升(EBOV)和 2871 拷贝/ml(苏丹病毒)。Cepheid 系统也显示出良好的灵敏度(232 拷贝/ml)。LAMP 平台非常有前途,因为它是等温反应,不需要高精度的仪器,并且可以被认为是一种即时护理(PoC)工具。其分析灵敏度为 1 拷贝/反应。但是,由于尚无来自实际生活研究的数据,因此现在就其可行性提供任何指示还为时过早。此外,2014 年 11 月,世卫组织建议根据 ASSURED 标准开发快速诊断测试(RDT)。此后,已经生产了几种 RDT 检测方法,其中大多数是基于免疫层析方法检测针对埃博拉病毒蛋白的抗体的快速检测方法。为此目的使用了几种病毒抗原:VP40、NP 和 GP。这些检测方法根据使用的蛋白显示出不同的灵敏度:VP40 为 57.4-93.1%,GP 为 53-88.9%,NP 为 85%,与参考分子检测相比。从这些结果可以推断,没有任何 RDT 达到世卫组织推荐的 99%的灵敏度,因此,在疑似病例中,任何 RDT 阴性结果都应通过分子检测进行确认。

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