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适应新型分离条件嗜压菌株 Halomonas titanicae ANRCS81 应激条件的策略。

Strategy for the Adaptation to Stressful Conditions of the Novel Isolated Conditional Piezophilic Strain Halomonas titanicae ANRCS81.

机构信息

Shanghai Key Laboratory of Polar Life and Environment Sciences, School of Oceanography, Shanghai Jiao Tong University, Shanghai, China.

School of Environmental Science and Engineering, Shanghai Jiao Tong University, Shanghai, China.

出版信息

Appl Environ Microbiol. 2023 Mar 29;89(3):e0130422. doi: 10.1128/aem.01304-22. Epub 2023 Mar 13.

Abstract

Microorganisms have successfully predominated deep-sea ecosystems, while we know little about their adaptation strategy to multiple environmental stresses therein, including high hydrostatic pressure (HHP). Here, we focused on the genus , one of the most widely distributed halophilic bacterial genera in marine ecosystems and isolated a piezophilic strain Halomonas titanicae ANRCS81 from Antarctic deep-sea sediment. The strain grew under a broad range of temperatures (2 to 45°C), pressures (0.1 to 55 MPa), salinities (NaCl, 0.5 to 17.5%, wt/vol), and chaotropic agent (Mg, 0 to 0.9 M) with either oxygen or nitrate as an electron acceptor. Genome annotation revealed that strain ANRCS81 expressed potential antioxidant genes/proteins and possessed versatile energy generation pathways. Based on the transcriptomic analysis, when the strain was incubated at 40 MPa, genes related to antioxidant defenses, anaerobic respiration, and fermentation were upregulated, indicating that HHP induced intracellular oxidative stress. Under HHP, superoxide dismutase (SOD) activity increased, glucose consumption increased with less CO generation, and nitrate/nitrite consumption increased with more ammonium generation. The cellular response to HHP represents the common adaptation developed by to inhabit and drive geochemical cycling in deep-sea environments. Microbial growth and metabolic responses to environmental changes are core aspects of adaptation strategies developed during evolution. In particular, high hydrostatic pressure (HHP) is the most common but least examined environmental factor driving microbial adaptation in the deep sea. According to recent studies, microorganisms developed a common adaptation strategy to multiple stresses, including HHP, with antioxidant defenses and energy regulation as key components, but experimental data are lacking. Meanwhile, cellular SOD activity is elevated under HHP. The significance of this research lies in identifying the HHP adaptation strategy of a strain at the genomic, transcriptomic, and metabolic activity levels, which will allow researchers to bridge environmental factors with the ecological function of marine microorganisms.

摘要

微生物已成功在深海生态系统中占据主导地位,然而我们对它们在其中适应多种环境压力的策略知之甚少,包括高压(HHP)。在这里,我们专注于属,这是海洋生态系统中分布最广泛的嗜盐细菌属之一,从南极深海沉积物中分离出一种嗜压菌株 Halomonas titanicae ANRCS81。该菌株在较宽的温度(2 至 45°C)、压力(0.1 至 55MPa)、盐度(NaCl,0.5 至 17.5%,重量/体积)和变构剂(Mg,0 至 0.9M)范围内以及以氧气或硝酸盐作为电子受体的条件下生长。基因组注释表明,菌株 ANRCS81 表达了潜在的抗氧化基因/蛋白,并具有多种能量产生途径。基于转录组分析,当菌株在 40MPa 下孵育时,与抗氧化防御、厌氧呼吸和发酵相关的基因上调,表明 HHP 诱导细胞内氧化应激。在 HHP 下,超氧化物歧化酶(SOD)活性增加,葡萄糖消耗增加而 CO 生成减少,硝酸盐/亚硝酸盐消耗增加而氨生成增加。细胞对 HHP 的反应代表了属开发的共同适应策略,以栖息和驱动深海环境中的地球化学循环。微生物对环境变化的生长和代谢反应是进化过程中适应策略发展的核心方面。特别是,高压(HHP)是驱动深海微生物适应的最常见但研究最少的环境因素。根据最近的研究,微生物已经开发出一种共同的适应策略来应对多种压力,包括 HHP,抗氧化防御和能量调节是关键组成部分,但缺乏实验数据。同时,细胞 SOD 活性在 HHP 下升高。这项研究的意义在于在基因组、转录组和代谢活性水平上确定菌株的 HHP 适应策略,这将使研究人员能够将环境因素与海洋微生物的生态功能联系起来。

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