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使用CDK1-细胞周期蛋白B对SLX4的MUS81结合区域进行体外磷酸化的实验方案。

Protocol for in vitro phosphorylation of the MUS81-binding region of SLX4 using CDK1-cyclin B.

作者信息

Payliss Brandon J, Wyatt Haley D M

机构信息

Department of Biochemistry, University of Toronto, Toronto, ON M56 1A8, Canada.

Department of Biochemistry, University of Toronto, Toronto, ON M56 1A8, Canada; Canada Research Chairs Program, Temerty Faculty of Medicine, University of Toronto, Toronto, ON M5S 1A8, Canada.

出版信息

STAR Protoc. 2023 Mar 13;4(2):102152. doi: 10.1016/j.xpro.2023.102152.

DOI:10.1016/j.xpro.2023.102152
PMID:36917604
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10025271/
Abstract

Phosphorylation is a post-translational modification that can alter protein structure and regulate protein-protein interactions. Here, we present a procedure for in vitro phosphorylation of the MUS81-binding region of SLX4 (SLX4) using cyclin-dependent kinase 1-cyclin B. We describe steps for the dialysis and phosphorylation of target proteins followed by purification using size-exclusion chromatography. Finally, we detail a system to monitor phosphorylation effectiveness and identify phosphorylated residues. We anticipate this protocol to be readily adapted for other protein targets or kinases. For complete details on the use and execution of this protocol, please refer to Payliss et al. (2022)..

摘要

磷酸化是一种翻译后修饰,可改变蛋白质结构并调节蛋白质-蛋白质相互作用。在此,我们展示了一种使用细胞周期蛋白依赖性激酶1-细胞周期蛋白B对SLX4(SLX4)的MUS81结合区域进行体外磷酸化的方法。我们描述了靶蛋白的透析和磷酸化步骤,随后使用尺寸排阻色谱法进行纯化。最后,我们详细介绍了一个监测磷酸化效果并鉴定磷酸化残基的系统。我们预计该方案可轻松适用于其他蛋白质靶标或激酶。有关该方案的使用和执行的完整详细信息,请参考Payliss等人(2022年)的文献。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5050/10025271/f9c42180a2f1/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5050/10025271/67f4f3ce3fb5/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5050/10025271/a3a54c04b97d/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5050/10025271/769018574743/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5050/10025271/8c67f694e97f/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5050/10025271/f408066d6e1f/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5050/10025271/2b963472458b/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5050/10025271/f9c42180a2f1/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5050/10025271/67f4f3ce3fb5/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5050/10025271/a3a54c04b97d/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5050/10025271/769018574743/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5050/10025271/8c67f694e97f/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5050/10025271/f408066d6e1f/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5050/10025271/2b963472458b/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5050/10025271/f9c42180a2f1/gr6.jpg

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本文引用的文献

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Cell Rep. 2022 Oct 25;41(4):111537. doi: 10.1016/j.celrep.2022.111537.
2
Investigation of Phosphorylation-Induced Folding of an Intrinsically Disordered Protein by Coarse-Grained Molecular Dynamics.用粗粒化分子动力学研究磷酸化诱导的无规卷曲蛋白质的折叠。
J Chem Theory Comput. 2021 May 11;17(5):3203-3220. doi: 10.1021/acs.jctc.1c00155. Epub 2021 Apr 28.
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The regulation mechanism of phosphorylation and mutations in intrinsically disordered protein 4E-BP2.
磷酸化和突变在无规则卷曲蛋白 4E-BP2 中的调控机制。
Phys Chem Chem Phys. 2020 Feb 7;22(5):2938-2948. doi: 10.1039/c9cp05888e. Epub 2020 Jan 17.
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DNA damage kinase signaling: checkpoint and repair at 30 years.DNA 损伤激酶信号转导:30 年来的检查点和修复。
EMBO J. 2019 Sep 16;38(18):e101801. doi: 10.15252/embj.2019101801. Epub 2019 Aug 8.
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Illuminating the dark phosphoproteome.照亮黑暗的磷酸化蛋白质组。
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