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探索 Cyanobactin 大环化酶 PatGmac 的极限: PawS 衍生肽向日葵胰蛋白酶抑制剂-1 和环肽 Kalata B1 的环化。

Exploring the Limits of Cyanobactin Macrocyclase PatGmac: Cyclization of PawS-Derived Peptide Sunflower Trypsin Inhibitor-1 and Cyclotide Kalata B1.

机构信息

Pharmacognosy, Department of Pharmaceutical Biosciences, Uppsala University, Biomedical Centre, Box 591, SE-75124 Uppsala, Sweden.

Department of Chemistry, Marine Biodiscovery Centre, University of Aberdeen, Aberdeen AB24 3UE, Scotland, U.K.

出版信息

J Nat Prod. 2023 Mar 24;86(3):566-573. doi: 10.1021/acs.jnatprod.2c01158. Epub 2023 Mar 14.

Abstract

The subtilisin-like macrocyclase PatGmac is produced by the marine cyanobacterium . This enzyme is involved in the last step of the biosynthesis of patellamides, a cyanobactin type of ribosomally expressed and post-translationally modified cyclic peptides. PatGmac recognizes, cleaves, and cyclizes precursor peptides after a specific recognition motif comprised of a C-terminal tail with the sequence motif -AYDG. The result is the native macrocyclic patellamide, which has eight amino acid residues. Macrocyclase activity can be exploited by incorporating that motif in other short linear peptide precursors, which then are formed into head-to-tail cyclized peptides. Here, we explore the possibility of using PatGmac in the cyclization of peptides larger than the patellamides, namely, the PawS-derived peptide sunflower trypsin inhibitor-1 (SFTI-1) and the cyclotide kalata B1. These peptides fall under two distinct families of disulfide constrained macrocyclic plant peptides. They are both implicated as scaffolds for drug design due to their structures and unusual stability. We show that PatGmac can be used to efficiently cyclize the 14 amino acid residue long SFTI-1, but less so the 29 amino acid residue long kalata B1.

摘要

海洋蓝细菌产生的枯草溶菌素样大环内酯酶 PatGmac 参与了派特酰胺生物合成的最后一步,派特酰胺是一种核糖体表达和翻译后修饰的环肽氰基细菌素。PatGmac 识别、切割和环化具有特定识别基序的前体肽,该基序由具有序列基序-AYDG 的 C 末端尾部组成。结果是天然的大环派特酰胺,它有八个氨基酸残基。可以通过将该基序整合到其他短线性肽前体中,利用大环酶活性,然后将其形成头尾环化的肽。在这里,我们探索了 PatGmac 在环化大于派特酰胺的肽中的可能性,即 PawS 衍生肽向日葵胰蛋白酶抑制剂-1(SFTI-1)和环肽 kalata B1。这些肽属于两种不同的二硫键约束的植物大环肽家族。由于它们的结构和不寻常的稳定性,它们都被认为是药物设计的支架。我们表明 PatGmac 可以有效地环化 14 个氨基酸残基长的 SFTI-1,但对 29 个氨基酸残基长的 kalata B1 的环化效果较差。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ab43/10043927/e0a975c6b1e2/np2c01158_0001.jpg

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