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利用计算机建模和 NMR 技术对 Strychnos innocua(Delile)根皮中的一些甾体化合物进行分析,以评估其作为潜在抗真菌药物的可能性。

In silico modelling and NMR Characterization of some steroids from Strychnos innocua (Delile) root bark as potential antifungal agents.

机构信息

Department of Chemistry, Federal University Gashua, Yobe State, Nigeria.

Department of Chemistry, Ahmadu Bello University, Zaria, Nigeria.

出版信息

Steroids. 2023 Jun;194:109222. doi: 10.1016/j.steroids.2023.109222. Epub 2023 Mar 15.

Abstract

The root bark of Strychnos innocua has long been employed by traditional healers to treat a variety of ill health conditions including fungal infections. The objective of this study was to isolate, characterized and evaluate the antifungal potential (insilico approach) of some steroids from root bark of S. innocua. Conventional method of column chromatography was carried out on the ethyl acetate root bark extract of S. innocua, leading to the isolation of two steroids. On the basis of 1D NMR, 2D NMR, GC-ESI/MS analyses, and literature comparisons, the compounds were characterized as Stigmast-5-en-3β-ol (1) and Campest-5-en-3β-ol (2). This is the first time these compounds have been isolated from the plant. The results of the in silico modelling of the compounds 1, 2, and fluconazole (control drug) with the binding sites of SAP2 from Candida albicans (PDB: 1EAG) demonstrated that the binding energies were -8.3, -8.0, and -7.1 kcal/mol, respectively. However, the modelling with binding sites of a deglycating enzyme fructosamine oxidase from Aspergillus fumigatus (PDB: 3DJE) demonstrated that the binding energies were -5.9, -7.2, and -8.0 for Stigmast-5-en-3β-ol (1) and Campest-5-en-3β-ol (2), and fluconazole, respectively. In conclusion, the study found that Stigmast-5-en-3-ol and Campest-5-en-3-ol are both present in the root bark of S. innocua. The compounds exhibited promising interaction with the binding sites of the protein target (SAP2 from C. albicans) compare to fluconazole.

摘要

Strychnos innocua 的根皮长期以来一直被传统治疗师用于治疗各种健康状况,包括真菌感染。本研究的目的是从 Strychnos innocua 的根皮中分离、表征和评估一些甾体的抗真菌潜力(计算方法)。对 Strychnos innocua 的乙酸乙酯根皮提取物进行了常规的柱层析,得到了两种甾体。根据 1D NMR、2D NMR、GC-ESI/MS 分析和文献比较,确定这些化合物分别为豆甾-5-烯-3β-醇(1)和菜油甾-5-烯-3β-醇(2)。这是这些化合物首次从该植物中分离出来。化合物 1、2 和氟康唑(对照药物)与白色念珠菌 SAP2 结合位点(PDB:1EAG)的计算机模拟结果表明,结合能分别为-8.3、-8.0 和-7.1 kcal/mol。然而,与曲霉属果糖胺氧化酶的去糖基化酶结合位点(PDB:3DJE)进行的建模表明,豆甾-5-烯-3β-醇(1)和菜油甾-5-烯-3β-醇(2)以及氟康唑的结合能分别为-5.9、-7.2 和-8.0。综上所述,该研究发现豆甾-5-烯-3β-醇和菜油甾-5-烯-3β-醇均存在于 Strychnos innocua 的根皮中。与氟康唑相比,这些化合物与蛋白靶标(白色念珠菌 SAP2)的结合位点表现出良好的相互作用。

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