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通过共价对接研究丙烯酰胺神经毒性的分子决定因素。

Molecular determinants of acrylamide neurotoxicity through covalent docking.

作者信息

Mueller Nicolas Pierre Friedrich, Carloni Paolo, Alfonso-Prieto Mercedes

机构信息

Institute for Advanced Simulations IAS-5, Institute of Neuroscience and Medicine INM-9, Computational Biomedicine, Forschungszentrum Jülich, Jülich, Germany.

Faculty of Mathematics and Natural Sciences, Heinrich Heine University Düsseldorf, Düsseldorf, Germany.

出版信息

Front Pharmacol. 2023 Mar 2;14:1125871. doi: 10.3389/fphar.2023.1125871. eCollection 2023.

Abstract

Acrylamide (ACR) is formed during food processing by Maillard reaction between sugars and proteins at high temperatures. It is also used in many industries, from water waste treatment to manufacture of paper, fabrics, dyes and cosmetics. Unfortunately, cumulative exposure to acrylamide, either from diet or at the workplace, may result in neurotoxicity. Such adverse effects arise from covalent adducts formed between acrylamide and cysteine residues of several neuronal proteins a Michael addition reaction. The molecular determinants of acrylamide reactivity and its impact on protein function are not completely understood. Here we have compiled a list of acrylamide protein targets reported so far in the literature in connection with neurotoxicity and performed a systematic covalent docking study. Our results indicate that acrylamide binding to cysteine is favored in the presence of nearby positively charged amino acids, such as lysines and arginines. For proteins with more than one reactive Cys, docking scores were able to discriminate between the primary ACR modification site and secondary sites modified only at high ACR concentrations. Therefore, docking scores emerge as a potential filter to predict Cys reactivity against acrylamide. Inspection of the ACR-protein complex structures provides insights into the putative functional consequences of ACR modification, especially for non-enzyme proteins. Based on our study, covalent docking is a promising computational tool to predict other potential protein targets mediating acrylamide neurotoxicity.

摘要

丙烯酰胺(ACR)在食品加工过程中,由糖和蛋白质在高温下通过美拉德反应形成。它还被用于许多行业,从污水处理到纸张、织物、染料和化妆品的制造。不幸的是,无论是通过饮食还是在工作场所,累积接触丙烯酰胺都可能导致神经毒性。这种不良反应源于丙烯酰胺与几种神经元蛋白质的半胱氨酸残基之间形成的共价加合物——迈克尔加成反应。丙烯酰胺反应性的分子决定因素及其对蛋白质功能的影响尚未完全了解。在这里,我们整理了一份迄今为止文献中报道的与神经毒性相关的丙烯酰胺蛋白质靶点列表,并进行了系统的共价对接研究。我们的结果表明,在附近存在带正电荷的氨基酸(如赖氨酸和精氨酸)的情况下,丙烯酰胺与半胱氨酸的结合更受青睐。对于具有多个反应性半胱氨酸的蛋白质,对接分数能够区分主要的ACR修饰位点和仅在高ACR浓度下修饰的次要位点。因此,对接分数成为预测半胱氨酸对丙烯酰胺反应性的潜在筛选指标。对ACR-蛋白质复合物结构的检查提供了对ACR修饰假定功能后果的见解,特别是对于非酶蛋白质。基于我们的研究,共价对接是一种有前途的计算工具,可用于预测介导丙烯酰胺神经毒性的其他潜在蛋白质靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d570/10018202/7478e08ce3a3/fphar-14-1125871-g001.jpg

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