Department of Pathology, Molecular Medicine and Cancer Research Center, Basic Medicine College, Chongqing Medical University, Chongqing, China.
Department of pathophysiology, Chongqing Medical University, Chongqing, China.
Biotechnol Genet Eng Rev. 2024 Oct;40(2):1024-1048. doi: 10.1080/02648725.2023.2191092. Epub 2023 Mar 21.
The impact of RHBDF2 on the expression and potential function in many cancers is still unknown. Therefore, the expression and methylation modification of RHBDF2 were evaluated across TCGA cancers in this study. Moreover, two methods, COX regression and Kaplan-Meier, were utilized for analyses of the prognoses of RHBDF2 in patients. Besides, the association between RHBDF2 and immune microenvironment, mutation, tumor mutation burden and microsatellite instability was analyzed with Pearson correlation. We verified RHBDF2 expression in hepatocellular carcinoma (HCC) compared with normal cell and tissue samples, detected the effects of RHBDF2 knockdown on biological functions in HCC cells, and detected CD4, CD8 and CD68 expression in hepatocellular carcinoma tissues and paired normal tissues. Given these results, the significant mRNA overexpression and promoter hypomethylation of RHBDF2 in various tumor types was showed, and a clear relationship between RHBDF2 overexpression and unfavourable overall survival and progression-free survival was observed, including liver hepatocellular carcinoma (LIHC), glioma (GBMLGG) and pancreatic adenocarcinoma (PAAD). Additionally, hypomethylation of RHBDF2 can affect the overall survival in some tumors. Furthermore, a clear correlation between RHBDF2 and infiltration of immune cells, immune-related molecules, TMB and MSI was observed. Besides, RHBDF2 expression is upregulated in HCC cells and tissues, and RHBDF2 knockdown could decrease the cell adhesion ability of HCC cells. More importantly, the expression of CD4, CD8 and CD68 was higher in HCC tissues. Altogether, the research denoted that RHBDF2 can be a prognostic biomarker for cancers according to these results and participate in cell adhesion of HCC cells.
RHBDF2 对许多癌症的表达和潜在功能的影响尚不清楚。因此,本研究评估了 RHBDF2 在 TCGA 癌症中的表达和甲基化修饰。此外,还利用 COX 回归和 Kaplan-Meier 两种方法分析了 RHBDF2 对患者预后的影响。此外,还通过 Pearson 相关性分析了 RHBDF2 与免疫微环境、突变、肿瘤突变负荷和微卫星不稳定性的关系。我们验证了 RHBDF2 在肝癌(HCC)与正常细胞和组织样本中的表达,检测了 RHBDF2 敲低对 HCC 细胞生物学功能的影响,并检测了肝癌组织和配对正常组织中 CD4、CD8 和 CD68 的表达。根据这些结果,显示了 RHBDF2 在各种肿瘤类型中的显著 mRNA 过表达和启动子低甲基化,并且观察到 RHBDF2 过表达与不良的总生存期和无进展生存期之间存在明显的关系,包括肝肝癌(LIHC)、神经胶质瘤(GBMLGG)和胰腺腺癌(PAAD)。此外,RHBDF2 的低甲基化可影响某些肿瘤的总生存期。此外,还观察到 RHBDF2 与免疫细胞浸润、免疫相关分子、TMB 和 MSI 之间存在明显的相关性。此外,RHBDF2 在 HCC 细胞和组织中的表达上调,并且 RHBDF2 敲低可以降低 HCC 细胞的细胞黏附能力。更重要的是,CD4、CD8 和 CD68 的表达在 HCC 组织中更高。总之,根据这些结果,研究表明 RHBDF2 可以作为癌症的预后生物标志物,并参与 HCC 细胞的细胞黏附。