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亲代年龄效应在拟南芥跨代体突变率中的持续存在。

Persistence of parental age effect on somatic mutation rates across generations in Arabidopsis.

机构信息

Department of Biotechnology, Bhupat and Jyoti Mehta School of Biosciences, Indian Institute of Technology-Madras, Chennai, 600 036, India.

Department of Plant Molecular Biology, University of Delhi South Campus, Benito Juarez Road, New Delhi, 110021, India.

出版信息

BMC Plant Biol. 2023 Mar 22;23(1):152. doi: 10.1186/s12870-023-04150-w.

Abstract

In the model plant Arabidopsis thaliana, parental age is known to affect somatic mutation rates in their immediate progeny and here we show that this age dependent effect persists across successive generations. Using a set of detector lines carrying the mutated uidA gene, we examined if a particular parental age maintained across five consecutive generations affected the rates of base substitution (BSR), intrachromosomal recombination (ICR), frameshift mutation (FS), and transposition. The frequency of functional GUS reversions were assessed in seedlings as a function of identical/different parental ages across generations. In the context of a fixed parental age, BSR/ICR rates were unaffected in the first three generations, then dropped significantly in the 4th and increased in most instances in the 5th generation (e.g. BSR (F1 38 = 0.9, F2 38 = 1.14, F3 38 = 1.02, F4 38 = 0.5, F5 38 = 0.76)). On the other hand, with advancing parental ages, BSR/ICR rates remained high in the first two/three generations, with a striking resemblance in the pattern of mutation rates (BSR (F1 38 = 0.9, F1 43 = 0.53, F1 48 = 0.79, F1 53 = 0.83 and F2 38 = 1.14, F2 43 = 0.57, F2 48 = 0.64, F2 53 = 0.94). We adopted a novel approach of identifying and tagging flowers pollinated on a particular day, thereby avoiding biases due to potential emasculation induced stress responses. Our results suggest a time component in counting the number of generations a plant has passed through self-fertilization at a particular age in determining the somatic mutation rates.

摘要

在模式植物拟南芥中,已知亲本年龄会影响其后代的体细胞突变率,在这里我们表明这种与年龄相关的效应在连续几代中都存在。我们使用一组携带突变 uidA 基因的检测线,研究了在连续五代中保持不变的特定亲本年龄是否会影响碱基替换(BSR)、染色体内重组(ICR)、移码突变(FS)和转座的速率。我们通过检测在不同世代中相同/不同的亲本年龄下,功能 GUS 回复的频率来评估功能 GUS 回复的频率。在固定亲本年龄的情况下,BSR/ICR 速率在前三代不受影响,然后在第四代显著下降,并且在大多数情况下在第五代增加(例如 BSR(F1 38=0.9,F2 38=1.14,F3 38=1.02,F4 38=0.5,F5 38=0.76))。另一方面,随着亲本年龄的增加,BSR/ICR 速率在前两代/三代中保持较高水平,突变率模式具有惊人的相似性(BSR(F1 38=0.9,F1 43=0.53,F1 48=0.79,F1 53=0.83 和 F2 38=1.14,F2 43=0.57,F2 48=0.64,F2 53=0.94))。我们采用了一种新的方法,即识别和标记特定日期授粉的花朵,从而避免了由于潜在的去雄引起的应激反应导致的偏差。我们的结果表明,在确定特定年龄自交植物通过自交传递的世代数时,时间因素在计算体细胞突变率中起着重要作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/140f/10031922/5e62a11c4682/12870_2023_4150_Fig1_HTML.jpg

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