Eone J R, Assatse Y Tadjouteu, Kamsi R A Yossa, Abe M T Ottou, Ndjaka J M B
Faculty of Science, Department of Physics, University of Yaoundé I, P.O. Box 812, Yaoundé, Cameroon.
J Mol Model. 2023 Mar 23;29(4):106. doi: 10.1007/s00894-023-05510-x.
A large number of heterocyclic compounds are used as drugs, mainly due to the duality of lipophilicity playing in hydrophobic interactions and solubility with at least one hydrogen bond acceptor. The study of electronic properties is then important to better understand not only these charge distribution effects but also some other physicochemical properties involved in bioactivity to directly assess the bioavailability of these compounds and a possible classification in related applications. Phytomolecules such as chromenes are very accessible molecules exhibiting a bioactivity. Our study is focused on the impact of a number of functional groups acting on some 2,2-dimethylchromene derivatives, namely their global reactivity from the frontier molecular orbitals and local reactivity from the Fukui functions, where the carbonyl group acting as an electron withdrawal group has the most relevant effect, the solubility from the partition coefficient Log P strongly depending on the charge distribution and electronegative sites, the optical effects from the delocalization in the vinyl group, as well as the evaluation of the entropy associated with the molecular flexibility also acting on the bioactivity. Despite the effects of the wave function or density methods on the order of magnitude of these properties, these compounds are consistent with the rules for a potential oral drug candidate.
The calculations of the electronic properties were performed through two levels of theory: Hartree-Fock level as a wave function-based method as an ab initio reference including some physically consistent eigenvalues and density functional theory DFT as a correlation consistent method using different functionals: hybrid or with a long-range correction. The basis set used is a 6-311++G(d,p) Pople basis set including diffuse and polarization basis functions. The basis set is adapted to the size of the molecules and consequently to the degree of electronic localization. Gaussian 09 software was used for the computation.
大量杂环化合物被用作药物,主要是由于亲脂性在疏水相互作用以及与至少一个氢键受体的溶解性方面所起的双重作用。因此,电子性质的研究不仅对于更好地理解这些电荷分布效应很重要,而且对于理解参与生物活性的其他一些物理化学性质也很重要,以便直接评估这些化合物的生物利用度以及在相关应用中的可能分类。诸如色烯之类的植物分子是具有生物活性的非常容易获得的分子。我们的研究集中于一些作用于某些2,2 - 二甲基色烯衍生物的官能团的影响,即它们从前线分子轨道得出的全局反应性以及从福井函数得出的局部反应性,其中作为吸电子基团的羰基具有最相关的影响,分配系数Log P所反映的溶解度强烈依赖于电荷分布和电负性位点,乙烯基中离域作用产生的光学效应,以及与分子柔韧性相关的熵的评估也对生物活性有影响。尽管波函数或密度方法对这些性质的量级有影响,但这些化合物符合潜在口服药物候选物的规则。
电子性质的计算通过两个理论水平进行:作为基于波函数的方法的哈特里 - 福克水平作为从头算参考,包括一些物理上一致的本征值,以及作为使用不同泛函(混合或具有长程校正)的相关一致方法的密度泛函理论DFT。所使用的基组是6 - 311++G(d,p) 波普尔基组,包括弥散和极化基函数。该基组适合分子大小,从而适合电子定域程度。计算使用高斯09软件。