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棉花中HVA22基因家族的全基因组鉴定与表达分析及其在耐旱和耐盐性方面的功能分析

Genome-wide identification and expression analysis of the HVA22 gene family in cotton and functional analysis of in drought and salt tolerance.

作者信息

Zhang Haijun, Yuan Yanchao, Xing Huixian, Xin Ming, Saeed Muhammad, Wu Qi, Wu Jing, Zhuang Tao, Zhang Xiaopei, Mao Lili, Sun Xuezhen, Song Xianliang, Wang Zongwen

机构信息

State Key Laboratory of Crop Biology/Agronomy College, Shandong Agricultural University, Taian, China.

College of Life Sciences, Qingdao Agricultural University, Key Lab of Plant Biotechnology in Universities of Shandong Province, Qingdao, China.

出版信息

Front Plant Sci. 2023 Mar 6;14:1139526. doi: 10.3389/fpls.2023.1139526. eCollection 2023.

Abstract

The HVA22 family of genes, induced by abscisic acid and stress, encodes a class of stress response proteins with a conserved TB2/DP1/HVA22 domain that are unique among eukaryotes. Previous studies have shown that play an important role in plant responses to abiotic stresses. In the present study, 34, 32, 16, and 17 were identified in , , , and , respectively. These genes were classified into nine subgroups, randomly distributed on the chromosomes. Synteny analysis showed that the amplification of the were mainly due to segmental duplication or whole genome replication (WGD). Most promoter sequences contain a large number of drought response elements (MYB), defense and stress response elements (TC-rich repeats), and hormone response elements (ABRE, ERE, SARE, etc.), suggesting that may respond to adversity stresses. Expression profiling demonstrated that most showed a constitutive expression pattern in and could respond to abiotic stresses such as salt, drought, and low temperature. Overexpression of () in enhances salt and drought tolerance in Arabidopsis. Virus-induced gene silencing of reduced salt and drought tolerance in cotton. This indicates that plays an active role in the plant response to salt stress and drought stress. may act in plant response to adversity by altering the antioxidant capacity of plants. This study provides valuable information for the functional genomic study of the HVA22 gene family in cotton. It also provides a reference for further elucidation of the functional studies of HVA22 in plant resistance to abiotic stress response.

摘要

HVA22基因家族受脱落酸和胁迫诱导,编码一类具有保守TB2/DP1/HVA22结构域的胁迫响应蛋白,这类蛋白在真核生物中是独特的。先前的研究表明,其在植物对非生物胁迫的响应中起重要作用。在本研究中,分别在陆地棉、海岛棉、亚洲棉和草棉中鉴定出34个、32个、16个和17个该基因。这些基因被分为9个亚组,随机分布在染色体上。共线性分析表明,该基因家族的扩增主要是由于片段重复或全基因组复制(WGD)。大多数该基因的启动子序列包含大量干旱响应元件(MYB)、防御和胁迫响应元件(富含TC的重复序列)以及激素响应元件(ABRE、ERE、SARE等),这表明该基因家族可能对逆境胁迫作出响应。表达谱分析表明,大多数该基因家族成员在棉花中呈现组成型表达模式,并且能够对盐、干旱和低温等非生物胁迫作出响应。在拟南芥中过表达GhHVA22-1增强了其耐盐性和耐旱性。通过病毒诱导的基因沉默抑制陆地棉中GhHVA22-1的表达降低了棉花的耐盐性和耐旱性。这表明该基因家族在植物对盐胁迫和干旱胁迫的响应中发挥积极作用。该基因家族可能通过改变植物的抗氧化能力来参与植物对逆境的响应。本研究为棉花中HVA22基因家族的功能基因组学研究提供了有价值的信息。它也为进一步阐明HVA22在植物抗非生物胁迫响应中的功能研究提供了参考。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7aa4/10025482/bc2fff24f383/fpls-14-1139526-g001.jpg

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