Department of Chemistry, University of Colorado Denver, Denver, Colorado 80204, United States.
Department of Mathematics, University of Colorado Denver, Denver, Colorado 80204, United States.
J Phys Chem B. 2023 Apr 6;127(13):2887-2899. doi: 10.1021/acs.jpcb.2c07817. Epub 2023 Mar 23.
Post-translationally modified (PTM) amyloid-β (Aβ) species can play an important role in modulating Alzheimer's disease pathology. These relatively less populated modifications can cross-seed the wild-type Aβ peptides to produce fibrils that retain many structural and functional features of the original PTM variants. We focus on studies of internal flexibility in the cross-seeded Aβ fibrils originating from seeding with two PTM variants with modifications in the disordered N-terminal domain: Δ3 truncation and S8-phosphorylation. We employ an array of H solid-state NMR techniques, including line shape analysis over a broad temperature range, longitudinal relaxation, and quadrupolar CPMG, to assess the dynamics of the cross-seeded fibrils. The focus is placed on selected side-chain sites in the disordered N-terminal domain (G9 and V12) and hydrophobic core methyl and aromatic groups (L17, L34, M35, V36, and F19). We find that many of the essential features of the dynamics present in the original PTM seeds persist in the cross-seeded fibrils, and several of the characteristic features are even enhanced. This is particularly true for the activation energies of the rotameric motions and large-scale rearrangements of the N-terminal domain. Thus, our results on the dynamics complement prior structural and cell toxicity studies, suggesting that many PTM Aβ species can aggressively cross-seed the wild-type peptide in a manner that propagates the PTM's signature.
翻译后修饰(PTM)的淀粉样蛋白-β(Aβ)物种可以在调节阿尔茨海默病病理方面发挥重要作用。这些相对较少的修饰可以交叉种野生型 Aβ肽,产生保留原始 PTM 变体许多结构和功能特征的原纤维。我们专注于研究源自两种无序 N 端结构域修饰的 PTM 变体种子化的交叉种 Aβ原纤维的内部灵活性:Δ3 截断和 S8 磷酸化。我们采用一系列 H 固态 NMR 技术,包括在较宽温度范围内的线形分析、纵向弛豫和四极 CPMG,来评估交叉种原纤维的动力学。重点放在无序 N 端结构域(G9 和 V12)和疏水性核心甲基和芳基侧链上的选定侧链位点(L17、L34、M35、V36 和 F19)。我们发现,原始 PTM 种子中存在的许多动力学的基本特征在交叉种原纤维中仍然存在,并且一些特征甚至增强了。对于无序 N 端结构域的构象变化和大规模重排的旋转能垒尤其如此。因此,我们关于动力学的结果补充了先前的结构和细胞毒性研究,表明许多 PTM Aβ物种可以以传播 PTM 特征的方式积极地交叉种野生型肽。