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通过综合分析与验证评估PRDX家族在结肠腺癌中的表达及预后价值

Expression and prognostic value of PRDX family in colon adenocarcinoma by integrating comprehensive analysis and and validation.

作者信息

Zhou He, Li Lifa, Chen Jia, Hou Songlin, Zhou Tong, Xiong Yongfu

机构信息

The Second Department of Gastrointestinal Surgery, Affiliated Hospital of North Sichuan Medical College, Nanchong, China.

Institute of Hepatobiliary, Pancreatic and Intestinal Disease, North Sichuan Medical College, Nanchong, China.

出版信息

Front Oncol. 2023 Mar 9;13:1136738. doi: 10.3389/fonc.2023.1136738. eCollection 2023.

Abstract

BACKGROUND

The peroxiredoxin family, a crucial regulator of redox reactions, is strongly associated with various tumorigenesis. However, the role of peroxiredoxin4 (PRDX4) in colon adenocarcinoma (COAD) remains poorly understood.

METHODS

Multicenter databases, including GEPIA, HPA, UALCAN, cBioPortal, cancerSEA, STRING, CCLE, and LinkedOmics, comprehensively analyzed transcriptional expression, prognostic value, genetic alterations, signaling pathways, and associated genes of the PRDXs in COAD patients. Colony formation, transwell, flow cytometry, sphere formation, and xenograft assays were performed to validate further and .

RESULTS

Members of the PRDX family were differentially expressed in COAD, with each member showing varying degrees of genetic alterations. Intriguingly, only PRDX4 significantly correlated with COAD prognosis and stage. The single-cell sequencing suggested that PRDX4 is positively correlated with proliferation, apoptosis, and invasion, whereas negatively correlated with stemness. Moreover, PRDX4 involved in a series of critical biological processes, such as cell growth. Furthermore, and analyses indicated that knocking down PRDX4 inhibits the proliferation and invasion of HCT116 cells while promoting apoptosis and stemness.

CONCLUSIONS

We identified PRDX4 expression as a novel potential prognostic marker in COAD.

摘要

背景

过氧化物还原酶家族作为氧化还原反应的关键调节因子,与多种肿瘤发生密切相关。然而,过氧化物还原酶4(PRDX4)在结肠腺癌(COAD)中的作用仍知之甚少。

方法

利用多中心数据库,包括GEPIA、HPA、UALCAN、cBioPortal、cancerSEA、STRING、CCLE和LinkedOmics,全面分析COAD患者中PRDXs的转录表达、预后价值、基因改变、信号通路及相关基因。进行集落形成、Transwell、流式细胞术、成球和异种移植试验以进一步验证和。

结果

PRDX家族成员在COAD中差异表达,每个成员均显示出不同程度的基因改变。有趣的是,只有PRDX4与COAD预后和分期显著相关。单细胞测序表明,PRDX4与增殖、凋亡和侵袭呈正相关,而与干性呈负相关。此外,PRDX4参与了一系列关键的生物学过程,如细胞生长。此外,和分析表明,敲低PRDX4可抑制HCT116细胞的增殖和侵袭,同时促进凋亡和干性。

结论

我们确定PRDX4表达为COAD中一种新的潜在预后标志物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32db/10035177/ecff8031acc4/fonc-13-1136738-g001.jpg

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