Xu Haibo, Shao Zhonghe, Zhang Shuo, Liu Xin, Zeng Ping
Center for Mental Health Education and Research, Xuzhou Medical University, Xuzhou, China.
School of Management, Xuzhou Medical University, Xuzhou, China.
Front Psychiatry. 2023 Mar 9;14:1102811. doi: 10.3389/fpsyt.2023.1102811. eCollection 2023.
A greatly growing body of literature has revealed the mediating role of DNA methylation in the influence path from childhood maltreatment to psychiatric disorders such as post-traumatic stress disorder (PTSD) in adult. However, the statistical method is challenging and powerful mediation analyses regarding this issue are lacking.
To study how the maltreatment in childhood alters long-lasting DNA methylation changes which further affect PTSD in adult, we here carried out a gene-based mediation analysis from a perspective of composite null hypothesis in the Grady Trauma Project (352 participants and 16,565 genes) with childhood maltreatment as exposure, multiple DNA methylation sites as mediators, and PTSD or its relevant scores as outcome. We effectively addressed the challenging issue of gene-based mediation analysis by taking its composite null hypothesis testing nature into consideration and fitting a weighted test statistic.
We discovered that childhood maltreatment could substantially affected PTSD or PTSD-related scores, and that childhood maltreatment was associated with DNA methylation which further had significant roles in PTSD and these scores. Furthermore, using the proposed mediation method, we identified multiple genes within which DNA methylation sites exhibited mediating roles in the influence path from childhood maltreatment to PTSD-relevant scores in adult, with 13 for Beck Depression Inventory and 6 for modified PTSD Symptom Scale, respectively.
Our results have the potential to confer meaningful insights into the biological mechanism for the impact of early adverse experience on adult diseases; and our proposed mediation methods can be applied to other similar analysis settings.
大量不断增加的文献揭示了DNA甲基化在从童年期虐待到成人创伤后应激障碍(PTSD)等精神障碍的影响路径中的中介作用。然而,统计方法具有挑战性,且缺乏针对此问题的强大中介分析。
为了研究童年期虐待如何改变长期的DNA甲基化变化,进而影响成人的PTSD,我们在格雷迪创伤项目(352名参与者和16565个基因)中,从复合零假设的角度进行了基于基因的中介分析,将童年期虐待作为暴露因素,多个DNA甲基化位点作为中介因素,PTSD或其相关评分作为结果。我们通过考虑其复合零假设检验的性质并拟合加权检验统计量,有效地解决了基于基因的中介分析这一具有挑战性的问题。
我们发现童年期虐待可显著影响PTSD或与PTSD相关的评分,且童年期虐待与DNA甲基化相关,而DNA甲基化在PTSD及这些评分中进一步发挥重要作用。此外,使用所提出的中介方法,我们鉴定出多个基因,其中DNA甲基化位点在从童年期虐待到成人PTSD相关评分的影响路径中发挥中介作用,贝克抑郁量表有13个,改良PTSD症状量表有6个。
我们的结果有可能为早期不良经历对成人疾病影响的生物学机制提供有意义的见解;并且我们提出的中介方法可应用于其他类似的分析场景。