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基于代谢组学的列线图用于区分肺部结节患者的肺癌。

A nomogram based on metabolic profiling to discriminate lung cancer among patients with lung nodules.

机构信息

Department of Respiratory Medicine, The Second Affiliated Hospital of Dalian Medical University, Dalian, China.

Department of Critical Care Medicine, The Second Affiliated Hospital of Dalian Medical University, Dalian, China.

出版信息

J Int Med Res. 2023 Mar;51(3):3000605231161204. doi: 10.1177/03000605231161204.

Abstract

OBJECTIVE

To develop a nomogram that discriminates lung cancer from benign lung nodules through metabolic profiling.

METHODS

This was a retrospective cohort study that recruited 848 participants who were randomized into training and validation sets at a 7:3 ratio. Clinical characteristics and metabolic profiles were retrieved. Variables in the training set with statistically significant differences were selected for further least absolute shrinkage and selection operator (LASSO) regression. The nomogram was built from 13 variables identified by stepwise regression analysis. Receiver operating characteristic, calibration curve, and decision curve analyses were conducted to evaluate the performance of the nomogram by internal validation.

RESULTS

Thirteen variables were selected through LASSO regression to build the nomogram: age, sex, ornithine, tyrosine, glutamine, valine, serine, asparagine, arginine, methylmalonylcarnitine, tetradecenoylcarnitine, 3-hydroxyisovaleryl carnitine/2-methyl-3-hydroxybutyrylcarnitine, and hydroxybutyrylcarnitine. The nomogram had good discrimination for the training set, with an area under the curve of 0.836 (95% confidence interval: 0.830-0.890). Moreover, the calibration curve with 1000 bootstrap resamples showed that the predicted value coincided well with the actual value. Decision curve analysis described a net benefit superior to baseline within the threshold probability range of 15% to 93%.

CONCLUSIONS

The nomogram constructed from metabolic profiling accurately predicted risk of lung cancer.

摘要

目的

通过代谢组学建立鉴别肺癌与肺良性结节的列线图。

方法

这是一项回顾性队列研究,共纳入 848 名参与者,按 7:3 的比例随机分为训练集和验证集。提取临床特征和代谢谱数据。对训练集中有统计学差异的变量进行逐步最小绝对收缩和选择算子(LASSO)回归分析,选择进一步分析的变量。通过逐步回归分析确定的 13 个变量构建列线图。采用内部验证的受试者工作特征曲线、校准曲线和决策曲线分析来评估列线图的性能。

结果

通过 LASSO 回归分析筛选出 13 个变量构建列线图:年龄、性别、鸟氨酸、酪氨酸、谷氨酰胺、缬氨酸、丝氨酸、天冬酰胺、精氨酸、甲基丙二酰肉碱、十四烯酰肉碱、3-羟基异戊酰肉碱/2-甲基-3-羟基丁酸酰肉碱、羟丁酰肉碱。列线图对训练集具有良好的判别能力,曲线下面积为 0.836(95%置信区间:0.830-0.890)。此外,经过 1000 次 bootstrap 重采样的校准曲线表明,预测值与实际值吻合良好。决策曲线分析表明,在 15%至 93%的阈值概率范围内,净获益优于基线。

结论

基于代谢组学构建的列线图能准确预测肺癌风险。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d593/10052511/b678227c0a53/10.1177_03000605231161204-fig1.jpg

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