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利用全外显子组测序和DNA甲基化分析鉴定恶性卵巢甲状腺肿的致癌机制

Identifying the Carcinogenic Mechanism of Malignant Struma Ovarii Using Whole-Exome Sequencing and DNA Methylation Analysis.

作者信息

Yamashita Hitomi, Nakayama Kentaro, Kanno Kosuke, Ishibashi Tomoka, Ishikawa Masako, Sato Seiya, Iida Koji, Razia Sultana, Kyo Satoru

机构信息

Department of Obstetrics and Gynecology, Shimane University School of Medicine, Izumo 693-8501, Japan.

出版信息

Curr Issues Mol Biol. 2023 Feb 23;45(3):1843-1851. doi: 10.3390/cimb45030118.

Abstract

BACKGROUND

Since malignant struma ovarii is a very rare disease, its carcinogenic mechanism has not been elucidated. Here, we sought to identify the genetic lesions that may have led to the carcinogenesis of a rare case of malignant struma ovarii (follicular carcinoma) with peritoneal dissemination.

METHODS

DNA was extracted from the paraffin-embedded sections of normal uterine tissues and malignant struma ovarii for genetic analysis. Whole-exome sequencing and DNA methylation analysis were then performed.

RESULTS

Germline variants of , , and , which are tumor-suppressor genes, were detected by whole-exome sequencing. Somatic uniparental disomy (UPD) was also observed in these three genes. Additionally, the methylation of , , , , , and , which are associated with tumor growth suppression, was detected by DNA methylation analysis.

CONCLUSIONS

Somatic UPD and DNA methylation in tumor suppressor genes may be associated with the pathogenesis of malignant struma ovarii. To our knowledge, this is the first report of whole-exome sequencing and DNA methylation analysis in malignant struma ovarii. Genetic and DNA methylation analysis may help elucidate the mechanism of carcinogenesis in rare diseases and guide treatment decisions.

摘要

背景

由于恶性卵巢甲状腺肿是一种非常罕见的疾病,其致癌机制尚未阐明。在此,我们试图确定可能导致一例伴有腹膜播散的罕见恶性卵巢甲状腺肿(滤泡癌)发生癌变的基因损伤。

方法

从正常子宫组织和恶性卵巢甲状腺肿的石蜡包埋切片中提取DNA进行基因分析。然后进行全外显子组测序和DNA甲基化分析。

结果

通过全外显子组测序检测到肿瘤抑制基因、和的胚系变异。在这三个基因中还观察到体细胞单亲二倍体(UPD)。此外,通过DNA甲基化分析检测到与肿瘤生长抑制相关的、、、、和的甲基化。

结论

肿瘤抑制基因中的体细胞UPD和DNA甲基化可能与恶性卵巢甲状腺肿的发病机制有关。据我们所知,这是首次对恶性卵巢甲状腺肿进行全外显子组测序和DNA甲基化分析的报告。基因和DNA甲基化分析可能有助于阐明罕见疾病的致癌机制并指导治疗决策。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dd4a/10047136/c41badfa6ab1/cimb-45-00118-g001.jpg

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