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美国先天性白内障患儿队列中多种族患者的基因检测评估。

Evaluation of Genetic Testing in a Cohort of Diverse Pediatric Patients in the United States with Congenital Cataracts.

机构信息

Department of Ophthalmology, Northwestern University Feinberg School of Medicine, Chicago, IL 60611, USA.

Division of Ophthalmology, Department of Surgery, Ann & Robert H. Lurie Children's Hospital of Chicago, Chicago, IL 60611, USA.

出版信息

Genes (Basel). 2023 Feb 28;14(3):608. doi: 10.3390/genes14030608.

Abstract

The aim of this study was to evaluate the diagnostic yield from prior genetic testing in a 20-year cohort of pediatric patients with congenital cataracts. A retrospective review of patients with congenital cataracts who underwent genetic testing was completed from 2003-2022. The diagnostic yield of the test was determined by variant classification and inheritance pattern. Variants from initial testing underwent reclassification in accordance with ACMG-AMP (American College of Medical Genetics and Genomics-American Association of Molecular Pathology) 2015 or 2020 ACMG CNV guidelines. A total of 95 variants were identified in 52 patients with congenital cataracts (42 bilateral, 10 unilateral); 42 % were White, 37% were Hispanic, 8% were Black, and 6% were Asian. The majority of patients (92%) did not have a family history of congenital cataracts but did have systemic illnesses (77%). Whole exome sequencing and targeted congenital cataract panels showed diagnostic yields of 46.2% and 37.5%, respectively. Microarray had the lowest yield at 11%. Compared to the initial classification, 16% (15 of 92 variants) had discrepant reclassifications. More testing is needed, and an increased focus is warranted in the field of ocular genetics on congenital cataracts, particularly in those with systemic illnesses and no family history, to advance our knowledge of this potentially blinding condition.

摘要

本研究旨在评估 20 年来先天性白内障儿科患者先前基因检测的诊断收益。对 2003 年至 2022 年期间接受基因检测的先天性白内障患者进行了回顾性研究。通过变异分类和遗传模式确定检测的诊断收益。根据 ACMG-AMP(美国医学遗传学与基因组学学院-分子病理学协会)2015 年或 2020 年 ACMG CNV 指南,对初始检测中的变异进行重新分类。在 52 例先天性白内障患者(42 例双侧,10 例单侧)中发现了 95 个变异,其中 42%为白人,37%为西班牙裔,8%为黑人,6%为亚洲人。大多数患者(92%)没有先天性白内障家族史,但有系统疾病(77%)。全外显子测序和靶向先天性白内障面板的诊断收益分别为 46.2%和 37.5%。微阵列的收益最低,为 11%。与初始分类相比,16%(92 个变异中的 15 个)的分类结果存在差异。需要进行更多的检测,并且有必要在眼部遗传学领域更加关注先天性白内障,特别是那些有系统疾病且无家族史的患者,以提高我们对这种潜在致盲疾病的认识。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b1f7/10048176/32711bf9594b/genes-14-00608-g001.jpg

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