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《关于安第斯艾马拉人适应高原缺氧的进化遗传适应,我们已知和未知的》

"What We Know and What We Do Not Know about Evolutionary Genetic Adaptation to High Altitude Hypoxia in Andean Aymaras".

机构信息

Cell Biology Unit, School of Medicine, San Andres University, La Paz 0201, Bolivia.

Division of Hematology, School of Medicine, University of Utah, Salt Lake City, UT 84132, USA.

出版信息

Genes (Basel). 2023 Mar 3;14(3):640. doi: 10.3390/genes14030640.

Abstract

Three well-studied populations living at high altitudes are Tibetans, Andeans (Aymaras and Quechuas), and Ethiopians. Unlike Tibetans and Ethiopians who have similar hemoglobin (Hb) levels as individuals living at sea level, Aymara Hb levels increase when living at higher altitudes. Our previous whole genome study of Aymara people revealed several selected genes that are involved in cardiovascular functions, but their relationship with Hb levels was not elucidated. Here, we studied the frequencies of known evolutionary-selected variants in Tibetan and Aymara populations and their correlation with high Hb levels in Aymara. We genotyped 177 Aymaras at three different altitudes: 400 m (Santa Cruz), 4000 m (La Paz), and 5000 m (Chorolque), and correlated the results with the elevation of residence. Some of the Tibetan-selected variants also exist in Aymaras, but at a lower prevalence. Two of 10 Tibetan selected variants of were found (rs13005507 and rs142764723) and these variants did not correlate with Hb levels. Allele frequencies of 5 Aymara selected SNPs (heterozygous and homozygous) at 4000 m (rs11578671_, rs34913965_, rs12448902_, rs10744822_, and rs487105_) were higher compared to Europeans. The allelic frequencies of rs11578671_, rs34913965_, and rs10744822_ were significantly higher for Aymaras living at 5000 m than those at 400 m elevation. Variant rs11578671, close to the coding region, correlated with Hb levels in females. Variant rs34913965 () correlated with leukocyte counts. Variants rs12448902 () and rs34913965 () associated with higher platelet levels. The correlation of these SNPs with blood cell counts demonstrates that the selected genetic variants in Aymara influence hematopoiesis and cardiovascular effects.

摘要

居住在高海拔地区的三个研究充分的人群是藏族人、安第斯人(艾马拉人和克丘亚人)和埃塞俄比亚人。与血红蛋白水平与海平面居住者相似的藏族人和埃塞俄比亚人不同,艾马拉人的血红蛋白水平在高海拔地区会升高。我们之前对艾马拉人的全基因组研究揭示了几个参与心血管功能的选定基因,但它们与血红蛋白水平的关系尚未阐明。在这里,我们研究了藏族人和艾马拉人中已知进化选择变体的频率及其与艾马拉人高血红蛋白水平的关系。我们对来自三个不同海拔高度(400 米(圣克鲁斯)、4000 米(拉巴斯)和 5000 米(乔尔夸尔)的 177 名艾马拉人进行了基因分型,并将结果与居住地的海拔高度相关联。一些藏族选择的变体也存在于艾马拉人中,但流行率较低。在 10 个中发现了 2 个藏族选择的变体(rs13005507 和 rs142764723),这些变体与血红蛋白水平无关。4000 米(rs11578671_、rs34913965_、rs12448902_、rs10744822_和 rs487105_)处的 5 个艾马拉人选择的 SNP(杂合子和纯合子)的等位基因频率与欧洲人相比更高。生活在 5000 米处的艾马拉人的等位基因频率 rs11578671_、rs34913965_和 rs10744822_明显高于生活在 400 米处的艾马拉人。位于 编码区附近的 rs11578671 与女性的血红蛋白水平相关。rs34913965()与白细胞计数相关。rs12448902()和 rs34913965()与较高的血小板水平相关。这些 SNP 与血细胞计数的相关性表明,艾马拉人中的选定遗传变体影响造血和心血管作用。

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