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可能成为胶质瘤诊断和预后的潜在标志物。

Could Be a Potential Marker for Diagnosis and Prognosis in Glioma.

机构信息

Key Laboratory of Dental Maxillofacial Reconstruction and Biological Intelligence Manufacturing, School of Stomatology, Lanzhou University, Lanzhou 730030, China.

Key Laboratory of Preclinical Study for New Drugs of Gansu Province, School of Basic Medical Sciences, Lanzhou University, Lanzhou 730030, China.

出版信息

Genes (Basel). 2023 Mar 12;14(3):701. doi: 10.3390/genes14030701.

Abstract

(1) Background: Glioma is among the most common brain tumors, and is difficult to eradicate with current therapeutic strategies due to its highly invasive and aggressive characteristics. Sestrin2 () is an autophagy inducer. The effect of on glioma is controversial and unclear. (2) Methods: We downloaded related RNA-seq data from the TCGA and GTEx databases. Bioinformatic analyses including differential gene expression analysis, KM survival curve analysis, univariate and multivariate Cox regression analyses, nomogram analysis, ROC curve analysis, gene function enrichment analysis, and immune cell infiltration analysis were conducted. In addition, data from the Human Protein Atlas (HPA) database were collected to validate expression in glioma. (3) Results: In comparison with normal tissue, expression of in glioma tissue was higher, and those with higher expressions had significantly lower overall survival rates. The results of univariate Cox regression analyses showed that can be a disadvantageous factor in poor glioma prognosis. Both nomograms and ROC curves confirmed these findings. Meanwhile, according to gene function analysis, may be involved in immune responses and the tumor microenvironment (TME). Based on the HPA database results, is localized in the cytosol and shows high expression in glioma. (4) Conclusions: The expression of in gliomas was positively relevant to a poorer prognosis, suggesting that could be used as a prognostic gene.

摘要

(1)背景:神经胶质瘤是最常见的脑肿瘤之一,由于其具有高度侵袭性和侵略性的特点,目前的治疗策略难以根除。Sesrin2(Sesn2)是一种自噬诱导剂。Sesn2 对神经胶质瘤的影响存在争议,目前尚不清楚。(2)方法:我们从 TCGA 和 GTEx 数据库下载了相关的 RNA-seq 数据。进行了生物信息学分析,包括差异基因表达分析、KM 生存曲线分析、单因素和多因素 Cox 回归分析、列线图分析、ROC 曲线分析、基因功能富集分析和免疫细胞浸润分析。此外,还收集了人类蛋白质图谱(HPA)数据库的数据来验证神经胶质瘤中 Sesn2 的表达。(3)结果:与正常组织相比,神经胶质瘤组织中 Sesn2 的表达更高,表达水平较高的患者总体生存率显著降低。单因素 Cox 回归分析结果表明,Sesn2 可能是神经胶质瘤预后不良的不利因素。列线图和 ROC 曲线都证实了这一发现。同时,根据基因功能分析,Sesn2 可能参与免疫反应和肿瘤微环境(TME)。根据 HPA 数据库的结果,Sesn2 定位于细胞质,在神经胶质瘤中呈高表达。(4)结论:Sesn2 在神经胶质瘤中的表达与预后不良呈正相关,提示 Sesn2 可作为一种预后基因。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a99e/10048065/8ee0816d4b17/genes-14-00701-g001.jpg

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