Línea de Investigación en Química Computacional, Grupo de Investigación GIFUJ, Departamento de Química, Facultad de Ciencias, Pontificia Universidad Javeriana, Bogota 110231, Colombia.
Departamento de Química, Universidad Autonoma Metropolitana-Iztapalapa, San Rafael Atlixco 186, Col. Vicentina, Iztapalapa, Ciudad de Mexico 09340, Mexico.
Molecules. 2023 Mar 15;28(6):2674. doi: 10.3390/molecules28062674.
Amphotericin B (AmB) is an antibiotic with a wide spectrum of action and low multidrug resistance, although it exhibits self-aggregation, low specificity, and solubility in aqueous media. An alternative for its oral administration is its encapsulation in polymers modified with bioconjugates. The aim of the present computational research is to determine the affinity between AmB and six bioconjugates to define which one could be more suitable. The CAM-B3LYP-D3/6-31+G(d,p) method was used for all computational calculations. The dimerization enthalpy of the most stable and abundant systems at pH = 7 allows obtaining this affinity order: AmB_1,2-distearoyl-sn-glycerol-3-phosphorylethanolamine (DSPE) > AmB_γ-cyclodextrin > AmB_DSPEc > AmB_retinol > AmB_cholesterol > AmB_dodecanol, where DSPEc is a DSPE analog. Quantum theory of atoms in molecules, the non-covalent interactions index, and natural bond orbital analysis revealed the highest abundance of noncovalent interactions for AmB-DSPE (51), about twice the number of interactions of the other dimers. Depending on the interactions' strength and abundance of the AmB-DSPE dimer, these are classified as strong: O-H---O (2), N-H---O (3) and weak: C-H---O (25), H---H (18), C-H---C (3). Although the C-H---O hydrogen bond is weak, the number of interactions involved in all dimers cannot be underestimated. Thus, non-covalent interactions drive the stabilization of copolymers, and from our analysis, the most promising candidates for encapsulating are DSPE and γ-cyclodextrin.
两性霉素 B(AmB)是一种具有广泛作用谱和低多药耐药性的抗生素,尽管它表现出自聚集、低特异性和在水性介质中的溶解度。其口服给药的替代方法是将其封装在与生物缀合物修饰的聚合物中。本计算研究的目的是确定 AmB 与六种生物缀合物之间的亲和力,以确定哪种缀合物更合适。所有计算均使用 CAM-B3LYP-D3/6-31+G(d,p) 方法进行。在 pH = 7 时最稳定和丰富的系统的二聚化焓允许获得这种亲和力顺序:AmB_1,2-二硬脂酰-sn-甘油-3-磷酸乙醇胺(DSPE)> AmB_γ-环糊精> AmB_DSPEc> AmB_retinol> AmB_胆固醇> AmB_dodecanol,其中 DSPEc 是 DSPE 的类似物。原子在分子中的量子理论,非共价相互作用指数和自然键轨道分析表明,AmB-DSPE 的非共价相互作用最多(51),是其他二聚体相互作用数目的两倍。根据 AmB-DSPE 二聚体相互作用的强度和丰度,这些相互作用被分类为强:O-H---O(2),N-H---O(3)和弱:C-H---O(25),H---H(18),C-H---C(3)。尽管 C-H---O 氢键较弱,但所有二聚体中涉及的相互作用数量不容忽视。因此,非共价相互作用驱动共聚物的稳定化,并且根据我们的分析,最有前途的封装候选物是 DSPE 和 γ-环糊精。