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磷酸化响应性螺旋-肽组装体的合理设计。

Rational Design of Phosphorylation-Responsive Coiled Coil-Peptide Assemblies.

机构信息

School of Biochemistry, University of Bristol, University Walk, Bristol, BS8 1TD, U.K.

School of Chemistry, University of Bristol, Cantock's Close, Bristol, BS8 1TS, U.K.

出版信息

ACS Synth Biol. 2023 Apr 21;12(4):1308-1319. doi: 10.1021/acssynbio.3c00064. Epub 2023 Mar 29.

Abstract

peptides and proteins that switch state in response to chemical and physical cues would advance protein design and synthetic biology. Here we report two designed systems that disassemble and reassemble upon site-specific phosphorylation and dephosphorylation, respectively. As starting points, we use hyperthermostable antiparallel and parallel coiled-coil heterotetramers, , AB systems, to afford control in downstream applications. The switches are incorporated by adding protein kinase A phosphorylation sites, R-R-X-S, with the phosphoacceptor serine residues placed to maximize disruption of the coiled-coil interfaces. The unphosphorylated peptides assemble as designed and unfold reversibly when heated. Addition of kinase to the assembled states unfolds them with half-lives of ≤5 min. Phosphorylation is reversed by Lambda Protein Phosphatase resulting in tetramer reassembly. We envisage that the new designed coiled-coil components, the switches, and a mechanistic model for them will be useful in synthetic biology, biomaterials, and biotechnology applications.

摘要

在响应化学和物理信号时发生状态变化的肽和蛋白质将推动蛋白质设计和合成生物学的发展。在这里,我们报告了两个分别通过特异性磷酸化和去磷酸化而解组装和再组装的设计系统。作为起点,我们使用超耐热的反平行和平行的卷曲螺旋异四聚体 AB 系统,为下游应用提供控制。通过添加蛋白激酶 A 的磷酸化位点 R-R-X-S,并将磷酸受体丝氨酸残基放置在最大限度地破坏卷曲螺旋界面的位置,来引入开关。未磷酸化的肽按设计组装,并在加热时可逆展开。当组装态中加入激酶时,它们会在半衰期≤5 分钟内展开。通过 Lambda 蛋白磷酸酶逆转磷酸化,导致四聚体重新组装。我们设想,新设计的卷曲螺旋组件、开关以及它们的机械模型将在合成生物学、生物材料和生物技术应用中具有重要作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a366/10127268/9a705f49e0eb/sb3c00064_0001.jpg

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