School of Food and Pharmaceutical Engineering, Nanjing Normal University, Nanjing, People's Republic of China.
Arch Microbiol. 2023 Mar 29;205(4):148. doi: 10.1007/s00203-023-03501-3.
A novel actinomycete, designated strain S1-112, was isolated from a mangrove soil sample from Hainan, China, and characterized using a polyphasic approach. Strain S1-112 showed the highest similarity of the 16S rRNA gene to Streptomonospora nanhaiensis 12A09 (99.24%). Their close relationship was further supported by phylogenetic analyses, which placed these two strains within a stable clade. The highest values of digital DNA-DNA hybridization (dDDH, 41.4%) and average nucleotide identity (ANI, 90.55%) were detected between strain S1-112 and Streptomonospora halotolerans NEAU-Jh2-17. Genotypic and phenotypic characteristics demonstrated that strain S1-112 could be distinguished from its closely related relatives. We also profiled the pan-genome and metabolic features of genomic assemblies of strains belonging to the genus Streptomonospora, indicating similar functional capacities and metabolic activities. However, all of these strains showed promising potential for producing diverse types of secondary metabolites. In conclusion, strain S1-112 represents a novel species of the genus Streptomonospora, for which the name Streptomonospora mangrovi sp. nov. was proposed. The type strain is S1-112 (= JCM 34292).
一株新的放线菌,命名为 S1-112 菌株,从中国海南红树林土壤样本中分离得到,并通过多相分类方法进行了特征描述。S1-112 菌株的 16S rRNA 基因与 Streptomonospora nanhaiensis 12A09 的相似度最高(99.24%)。系统发育分析进一步支持了它们之间的密切关系,这两个菌株都位于一个稳定的分支中。S1-112 菌株与 Streptomonospora halotolerans NEAU-Jh2-17 之间的数字 DNA-DNA 杂交(dDDH)和平均核苷酸同一性(ANI)值最高,分别为 41.4%和 90.55%。基于基因型和表型特征,S1-112 菌株可与其亲缘关系较近的菌株区分开来。我们还对属于 Streptomonospora 属的菌株的全基因组和代谢特征进行了分析,表明它们具有相似的功能能力和代谢活性。然而,所有这些菌株都显示出了产生多种类型次生代谢产物的巨大潜力。综上所述,S1-112 菌株代表了 Streptomonospora 属的一个新种,命名为 Streptomonospora mangrovi sp. nov.。其模式菌株为 S1-112(= JCM 34292)。