Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, People's Republic of China.
University of Chinese Academy of Science, Beijing, People's Republic of China.
Microbiol Spectr. 2023 Jun 15;11(3):e0177122. doi: 10.1128/spectrum.01771-22. Epub 2023 Mar 30.
Unlike species-area relationships (SARs) that have been widely reported for plants and animals on Earth, there is no clear understanding of the SARs for microorganisms. In this study, 358 specimens of 10 amphibian host species collected from the rural Chengdu region of southwest China were selected as island models for evaluating SAR curve shapes and assessing the skin microbiota from different amphibian species. The results showed that skin microbial diversity, measured using Hill's number, presented significant differences between hosts, but the difference was insignificant between habitat-specific classifications of hosts. As for microbial SARs, other than the classical power-law (PL) model describing an expected steady increase in microbial diversity as sampled skin area increases, two additional trends were observed: (i) microbial diversity first rises and gradually decreases after reaching a maximum accrual diversity (MaxAD) and (ii) microbial diversity decreases and starts to rise after reaching the minimum accrual diversity (MinAD). Among the four SAR statistical models compared, it was consistently found that the models that can describe MaxAD were favorably selected in the highest frequency. Models that can describe MinAD and PL model also performed reasonably well. However, PL had the poorest fitting power, implying the necessity of introducing biologically meaningful complex SAR models in microbial diversity research. In conclusion, through multihost analyses, our study provided compelling evidence that microbial SARs are complex and nonlinear. A variety of ecological mechanisms may be used for explaining these, including, but not limited to, community saturation, small-island effects, or sampling heterogeneity. In this study, we investigate species-area relationships (SARs) for skin-borne symbiotic microbes of wildlife hosts. Unlike the traditional SARs for plants and animals, symbiotic microbial SARs were complex. We found that both U-shaped and inverted U-shaped SAR models were widely favored for microbial taxa than the well-known power-law model in different host species. These favored models presented interesting statistical features, including minimal or maximal accrual diversity or inflection point. We provide intuitive derivations of these statistical properties. We showed that different habitat-specific amphibian hosts did not present distinct microbial diversity and skin-related SAR patterns. We predicted that approximately 600 to 1,400 cm (in two-dimensional [2D] measurement) or approximately 1,200 to 3 500 cm (in 3D measurement) are the skin area threshold range that can allow the emergence of minimal or maximal accrual microbial diversity with high chances. Finally, we list a variety of ecological mechanisms that may be used for explaining the observed nonlinear SAR trends.
与地球上植物和动物的物种-面积关系 (SARs) 广泛报道不同,对于微生物的 SARs 还没有明确的理解。在这项研究中,选择了来自中国西南农村成都地区的 10 种两栖宿主物种的 358 个标本作为岛屿模型,用于评估 SAR 曲线形状,并评估来自不同两栖物种的皮肤微生物群。结果表明,使用希尔数测量的皮肤微生物多样性在宿主之间存在显著差异,但在宿主的栖息地特定分类之间没有差异。至于微生物 SARs,除了描述随着采样皮肤面积增加而微生物多样性预期稳定增加的经典幂律 (PL) 模型外,还观察到另外两种趋势:(i) 微生物多样性先增加,然后在达到最大累积多样性 (MaxAD) 后逐渐减少,(ii) 微生物多样性减少,然后在达到最小累积多样性 (MinAD) 后开始增加。在所比较的四个 SAR 统计模型中,一致发现可以描述 MaxAD 的模型被高频选择。能够描述 MinAD 和 PL 模型的模型也表现得相当好。然而,PL 的拟合能力最差,这意味着在微生物多样性研究中需要引入具有生物学意义的复杂 SAR 模型。总之,通过多宿主分析,我们的研究提供了令人信服的证据,表明微生物 SARs 是复杂和非线性的。可能会使用多种生态机制来解释这些,包括但不限于群落饱和、小岛效应或采样异质性。在这项研究中,我们调查了野生动物宿主的皮肤共生微生物的物种-面积关系 (SARs)。与传统的植物和动物 SARs 不同,共生微生物 SARs 很复杂。我们发现,在不同的宿主物种中,U 形和倒 U 形 SAR 模型比著名的幂律模型更广泛地受到微生物类群的青睐。这些受青睐的模型具有有趣的统计特征,包括最小或最大累积多样性或拐点。我们提供了这些统计特性的直观推导。我们表明,不同的特定栖息地的两栖宿主没有呈现出明显不同的微生物多样性和皮肤相关的 SAR 模式。我们预测,大约 600 到 1400 cm(在二维[2D]测量中)或大约 1200 到 3500 cm(在 3D 测量中)是皮肤面积的阈值范围,可以使最小或最大累积微生物多样性以高概率出现。最后,我们列出了多种可能用于解释观察到的非线性 SAR 趋势的生态机制。