Department of Cardiology, Zhongda Hospital, School of Medicine, Southeast University, 87 Hunan Road, Nanjing, Jiangsu 210000, China.
Mediators Inflamm. 2023 Mar 23;2023:8347759. doi: 10.1155/2023/8347759. eCollection 2023.
Doxorubicin is one of the most common antitumor drugs. However, cardiotoxicity's side effect limits its clinical applicability. In the present study, Gene Expression Omnibus (GEO) datasets were applied to reanalyze differentially expressed genes (DEGs) and construct weighted correlation network analysis (WGCNA) modules of doxorubicin-induced cardiotoxicity in wild-type mice. Several other bioinformatics analyses were performed to pick out the hub gene, and then the correlation between the hub gene and immune infiltration was evaluated. In total, 120 DEGs were discovered in a mouse model of doxorubicin-induced cardiotoxicity, and PF-04217903, propranolol, azithromycin, etc. were found to be potential drugs against this pathological condition. Among all the DEGs, 14 were further screened out by WGCNA modules, of which Limd1 was upregulated and finally regarded as the hub gene after being validated in other GEO datasets. Limd1 was upregulated in the peripheral blood mononuclear cell (PBMC) of the rat model, and the area under curve (AUC) of the receiver operating characteristic curve (ROC) in diagnosing cardiotoxicity was 0.847. The GSEA and PPI networks revealed a potential immunocyte regulatory role of Limd1 in cardiotoxicity. The proportion of "dendritic cells activated" in the heart was significantly elevated, while "macrophage M1" and "monocytes" declined after in vivo doxorubicin application. Finally, Limd1 expression was significantly positively correlated with "dendritic cells activation' and negatively correlated with "monocytes" and "macrophages M1'. In summary, our results suggested that limd1 is a valuable biomarker and a potential inflammation regulator in doxorubicin-induced cardiotoxicity.
多柔比星是最常用的抗肿瘤药物之一。然而,其心脏毒性的副作用限制了它的临床应用。本研究应用基因表达综合数据库(GEO)数据集重新分析野生型小鼠多柔比星诱导的心脏毒性的差异表达基因(DEGs),构建加权相关网络分析(WGCNA)模块。进行了其他几种生物信息学分析以挑选出枢纽基因,然后评估该枢纽基因与免疫浸润的相关性。总共在多柔比星诱导的心脏毒性的小鼠模型中发现了 120 个 DEGs,发现 PF-04217903、普萘洛尔、阿奇霉素等可能是针对这种病理状况的潜在药物。在所有的 DEGs 中,WGCNA 模块进一步筛选出 14 个基因,其中 Limd1 上调,并在其他 GEO 数据集验证后最终被视为枢纽基因。Limd1 在大鼠模型的外周血单核细胞(PBMC)中上调,其诊断心脏毒性的受试者工作特征曲线(ROC)曲线下面积(AUC)为 0.847。GSEA 和 PPI 网络揭示了 Limd1 在心脏毒性中潜在的免疫细胞调节作用。心脏中“激活的树突状细胞”的比例显著升高,而体内多柔比星应用后“M1 型巨噬细胞”和“单核细胞”下降。最后,Limd1 表达与“树突状细胞激活”呈显著正相关,与“单核细胞”和“M1 型巨噬细胞”呈显著负相关。总之,我们的研究结果表明,Limd1 是多柔比星诱导的心脏毒性中有价值的生物标志物和潜在的炎症调节因子。