Department of Computational Physiology, Simula Research Laboratory, Oslo, Norway.
Int J Numer Method Biomed Eng. 2023 Jun;39(6):e3703. doi: 10.1002/cnm.3703. Epub 2023 Apr 5.
Computational fluid dynamics (CFD) in combination with patient-specific medical images has been used to correlate flow phenotypes with disease initiation, progression and outcome, in search of a prospective clinical tool. A large number of CFD software packages are available, but are typically based on rigid domains and low-order finite volume methods, and are often implemented in massive low-level C++ libraries. Furthermore, only a handful of solvers have been appropriately verified and validated for their intended use. Our goal was to develop, verify and validate an open-source CFD solver for moving domains, with applications to cardiovascular flows. The solver is an extension of the CFD solver Oasis, which is based on the finite element method and implemented using the FEniCS open source framework. The new solver, named OasisMove, extends Oasis by expressing the Navier-Stokes equations in the arbitrary Lagrangian-Eulerian formulation, which is suitable for handling moving domains. For code verification we used the method of manufactured solutions for a moving 2D vortex problem, and for validation we compared our results against existing high-resolution simulations and laboratory experiments for two moving domain problems of varying complexity. Verification results showed that the error followed the theoretical convergence rates. The temporal accuracy was second-order, while the spatial accuracy was second- and third-order using and finite elements, respectively. Validation results showed good agreement with existing benchmark results, by reproducing lift and drag coefficients with less than 1% error, and demonstrating the solver's ability to capture vortex patterns in transitional and turbulent-like flow regimes. In conclusion, we have shown that OasisMove is an open-source, accurate and reliable solver for cardiovascular flows in moving domains.
计算流体动力学 (CFD) 结合特定于患者的医学图像已被用于将流动表型与疾病的起始、进展和结果相关联,以寻找一种前瞻性的临床工具。有大量的 CFD 软件包可用,但它们通常基于刚性域和低阶有限体积方法,并且通常在大规模的低级 C++库中实现。此外,只有少数求解器已经过适当验证和验证,以确保其在预期用途中的使用。我们的目标是开发、验证和验证一种用于移动域的开源 CFD 求解器,该求解器适用于心血管流动。该求解器是 CFD 求解器 Oasis 的扩展,它基于有限元方法,并使用 FEniCS 开源框架实现。新求解器名为 OasisMove,通过在任意拉格朗日-欧拉公式中表达纳维-斯托克斯方程来扩展 Oasis,这适用于处理移动域。对于代码验证,我们使用了制造解决方案方法来解决移动二维涡旋问题,对于验证,我们将我们的结果与现有的高分辨率模拟和实验室实验进行了比较,以解决两个不同复杂程度的移动域问题。验证结果表明,误差遵循理论收敛速率。时间精度为二阶,而空间精度分别为二阶和三阶,使用 和 有限元。验证结果表明,通过使用小于 1%的误差再现升力和阻力系数,以及展示求解器在过渡和类湍流流动状态下捕获涡旋模式的能力,与现有基准结果具有良好的一致性。总之,我们已经表明 OasisMove 是一种用于移动域心血管流动的开源、准确和可靠的求解器。