Farm Hui Jia, Clerx Michael, Cooper Fergus, Polonchuk Liudmila, Wang Ken, Gavaghan David J, Lei Chon Lok
Department of Computer Science, University of Oxford, Oxford, United Kingdom.
Centre for Mathematical Medicine and Biology, School of Mathematical Sciences, University of Nottingham, Nottingham, United Kingdom.
Front Pharmacol. 2023 Mar 20;14:1110555. doi: 10.3389/fphar.2023.1110555. eCollection 2023.
Reduction of the rapid delayed rectifier potassium current ( ) drug binding to the human Ether-à-go-go-Related Gene (hERG) channel is a well recognised mechanism that can contribute to an increased risk of Torsades de Pointes. Mathematical models have been created to replicate the effects of channel blockers, such as reducing the ionic conductance of the channel. Here, we study the impact of including state-dependent drug binding in a mathematical model of hERG when translating hERG inhibition to action potential changes. We show that the difference in action potential predictions when modelling drug binding of hERG using a state-dependent model versus a conductance scaling model depends not only on the properties of the drug and whether the experiment achieves steady state, but also on the experimental protocols. Furthermore, through exploring the model parameter space, we demonstrate that the state-dependent model and the conductance scaling model generally predict different action potential prolongations and are not interchangeable, while at high binding and unbinding rates, the conductance scaling model tends to predict shorter action potential prolongations. Finally, we observe that the difference in simulated action potentials between the models is determined by the binding and unbinding rate, rather than the trapping mechanism. This study demonstrates the importance of modelling drug binding and highlights the need for improved understanding of drug trapping which can have implications for the uses in drug safety assessment.
快速延迟整流钾电流( )的降低以及药物与人醚 - 去极化相关基因(hERG)通道的结合是一种公认的机制,可导致尖端扭转型室速风险增加。已创建数学模型来复制通道阻滞剂的作用,例如降低通道的离子电导。在此,我们研究在将hERG抑制转化为动作电位变化时,在hERG数学模型中纳入状态依赖性药物结合的影响。我们表明,使用状态依赖性模型与电导缩放模型对hERG药物结合进行建模时,动作电位预测的差异不仅取决于药物的特性以及实验是否达到稳态,还取决于实验方案。此外,通过探索模型参数空间,我们证明状态依赖性模型和电导缩放模型通常预测不同的动作电位延长,且不可互换,而在高结合和解离速率下,电导缩放模型倾向于预测较短的动作电位延长。最后,我们观察到模型之间模拟动作电位的差异由结合和解离速率决定,而非捕获机制。本研究证明了对药物结合建模的重要性,并强调需要更好地理解药物捕获,这可能对药物安全性评估的应用产生影响。