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(法瑞)帕克,1934年的完整叶绿体基因组。

The complete chloroplast genome of (franch.) Pax, 1934.

作者信息

Zhao Hongye, Zhang Zhaolei, Li Xinyi, Tian Yu, Zhao Jingyi, Liu Jinxin, Shi Linchun

机构信息

Hebei Key Laboratory of Study and Exploitation of Chinese Medicine, Chengde Medical University, Chengde, P.R. China.

Key Laboratory of Chinese Medicine Resources Conservation, State Administration of Traditional Chinese Medicine of the People's Republic of China, Engineering Research Center of Chinese Medicine Resource of Ministry of Education, Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing, P.R. China.

出版信息

Mitochondrial DNA B Resour. 2023 Apr 3;8(4):471-474. doi: 10.1080/23802359.2023.2195514. eCollection 2023.

DOI:10.1080/23802359.2023.2195514
PMID:37025399
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10071897/
Abstract

(Franch.) Pax belongs to subseries distancs of (Caryophyllaceae), and is mainly distributed in north-eastern Asia. The complete chloroplast (cp) genome of was assembled and annotated for the first time in this study. The cp genome of is 149,732 bp in length with the GC content of 36.57%, and it consists of four subregions: a large single-copy (LSC) region of 81,156 bp, a small single-copy (SSC) region of 16,894 bp and two inverted repeats (IR) regions of 25,841 bp each. The cp genome of encodes a total of 111 unique genes, which are 77 protein-coding genes, four rRNA genes, and 30 tRNA genes. The results of phylogenetic analysis strongly suggested that was a monophyletic group and forms an independent sister clade to other species of .

摘要

( Franch.)Pax属于石竹科(Caryophyllaceae)的远距亚组,主要分布于亚洲东北部。本研究首次组装并注释了该物种的完整叶绿体(cp)基因组。该物种的cp基因组长度为149,732 bp,GC含量为36.57%,由四个亚区组成:一个81,156 bp的大单拷贝(LSC)区、一个16,894 bp的小单拷贝(SSC)区和两个各为25,841 bp的反向重复(IR)区。该物种的cp基因组共编码111个独特基因,其中包括77个蛋白质编码基因、4个rRNA基因和30个tRNA基因。系统发育分析结果强烈表明,该物种是一个单系类群,并且与该属的其他物种形成一个独立的姐妹分支。

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The complete chloroplast genome of Prince Ginseng, (Miq.) Pax (Caryophyllaceae).太子参(石竹科孩儿参属)的完整叶绿体基因组。 (米基)帕克斯 (石竹科)
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