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[植物名称]的完整叶绿体基因组序列及其与其他姜科植物的比较分析。 （注：原文中“of”后面缺少具体植物名称，这里补充为“[植物名称]”使译文完整通顺）

Complete chloroplast genome sequence of and comparative analysis with other Zingiberaceae plants.

作者信息

Yang Li, Feng Chong, Cai Miao-Miao, Chen Jie-Hu, Ding Ping

机构信息

School of Pharmaceutical Sciences, Guangzhou University of Chinese Medicine, Guangzhou 510006, China.

Science Corporation of Gene, Guangzhou 510000, China.

出版信息

Chin Herb Med. 2020 Sep 16;12(4):375-383. doi: 10.1016/j.chmed.2020.05.008. eCollection 2020 Oct.

DOI:10.1016/j.chmed.2020.05.008
PMID:36120171
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9476707/
Abstract

OBJECTIVE

(AV) is an herb whose dried fruit has been extensively used in modern medicine to treat digestive system diseases such as dysentery, vomiting and abdominal pain. This paper aims to supplement chloroplast (cp) genomic resources and to be used in phylogenetic studies and identification of AV related plants.

METHODS

High-throughput sequencing technology was used to determine the complete sequence of the AV cp genome, and the sequence was then compared with three related species.

RESULTS

The genome size of AV we obtained was 163,968 bp with an obvious tetrad structure. The AV cp genome was observed to contain 125 unique genes and 81 simple sequence repeat (SSRs) had been determined and the majority of which were adenine-thymine (AT)-rich. Comparative analysis of genome sequence of four ginger plants showed that the , and genes are potential markers for identifying species. Phylogenetic analysis suggested that AV was closely related to and .

CONCLUSION

These results have brought useful genetic resources for further identification researches, DNA barcoding, resolving taxonomy and understanding the evolutionary mode of Zingiberaceae cp genome.

摘要

目的

AV是一种草药，其干燥果实已在现代医学中广泛用于治疗痢疾、呕吐和腹痛等消化系统疾病。本文旨在补充叶绿体（cp）基因组资源，并用于系统发育研究和AV相关植物的鉴定。

方法

采用高通量测序技术测定AV cp基因组的完整序列，然后将该序列与三个相关物种进行比较。

结果

我们获得的AV基因组大小为163,968 bp，具有明显的四分体结构。观察到AV cp基因组包含125个独特基因，已确定81个简单序列重复（SSR），其中大部分富含腺嘌呤-胸腺嘧啶（AT）。四种姜科植物基因组序列的比较分析表明， 、 和 基因是鉴定 物种的潜在标记。系统发育分析表明，AV与 和 密切相关。

结论

这些结果为进一步的鉴定研究、DNA条形码、解决分类学问题以及理解姜科cp基因组的进化模式带来了有用的遗传资源。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5bca/9476707/d2dbac843b46/gr8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5bca/9476707/bb8addb663fb/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5bca/9476707/a4613719d26a/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5bca/9476707/d3c84ab1bada/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5bca/9476707/408c8164a1df/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5bca/9476707/6c89ea9f55ab/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5bca/9476707/ae46bbdd32ba/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5bca/9476707/a2499beee1d0/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5bca/9476707/d2dbac843b46/gr8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5bca/9476707/bb8addb663fb/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5bca/9476707/a4613719d26a/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5bca/9476707/d3c84ab1bada/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5bca/9476707/408c8164a1df/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5bca/9476707/6c89ea9f55ab/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5bca/9476707/ae46bbdd32ba/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5bca/9476707/a2499beee1d0/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5bca/9476707/d2dbac843b46/gr8.jpg

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