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从花生根际分离的潜在植物生长促进菌——洋葱伯克霍尔德氏菌Q53菌株的全基因组序列

Whole-Genome Sequence of Burkholderia ambifaria Strain Q53, a Potential Plant Growth Promoter Isolated from the Rhizosphere of Peanut.

作者信息

Nievas Fiorela, Revale Santiago, Foresto Emiliano, Carezzano María Evangelina, Primo Emiliano, Alzari Pedro, Martínez Mariano, Ben-Assaya Mathilde, Mornico Damien, Santoro Maricel, Giordano Walter, Bogino Pablo

机构信息

Instituto de Biotecnología Ambiental y Salud (INBIAS-CONICET), Departamento de Biología Molecular, Facultad de Ciencias Exactas, Físico-Químicas y Naturales, Universidad Nacional de Río Cuarto, Río Cuarto, Córdoba, Argentina.

Wellcome Centre for Human Genetics, University of Oxford, Oxford, United Kingdom.

出版信息

Microbiol Resour Announc. 2023 May 17;12(5):e0002123. doi: 10.1128/mra.00021-23. Epub 2023 Apr 11.

DOI:10.1128/mra.00021-23
PMID:37039639
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10190645/
Abstract

We report the complete genome sequence of Burkholderia ambifaria strain Q53, an environmental rhizobacterium isolated from the rhizosphere of peanut plants. The genome consists of 7.4 Mbp distributed into three circular chromosomes and was determined using a hybrid long- and short-read assembly approach.

摘要

我们报告了 Burkholderia ambifaria 菌株 Q53 的完整基因组序列，该菌株是从花生植物根际分离出的一种环境根际细菌。该基因组由 740 万个碱基对组成，分布在三条环状染色体上，采用长读长和短读长混合组装方法测定。

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本文引用的文献

1
Genome mining of Burkholderia ambifaria strain T16, a rhizobacterium able to produce antimicrobial compounds and degrade the mycotoxin fusaric acid.从根际细菌伯克霍尔德菌 T16 中进行基因组挖掘，该菌能够产生抗微生物化合物并降解真菌毒素伏马酸。
World J Microbiol Biotechnol. 2022 May 17;38(7):114. doi: 10.1007/s11274-022-03299-0.
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RefSeq: expanding the Prokaryotic Genome Annotation Pipeline reach with protein family model curation.RefSeq：通过蛋白质家族模型编纂扩展原核生物基因组注释管道的覆盖范围。
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Effectiveness of multi-trait Burkholderia contaminans KNU17BI1 in growth promotion and management of banded leaf and sheath blight in maize seedling.多性状伯克霍尔德氏菌 KNU17BI1 对玉米幼苗带叶鞘斑病的促生和防治效果。
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RefSeq: an update on prokaryotic genome annotation and curation.RefSeq：原核生物基因组注释和管理的最新进展。
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NCBI prokaryotic genome annotation pipeline.美国国立生物技术信息中心原核生物基因组注释管道
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Draft Genome Sequence of Burkholderia ambifaria RZ2MS16, a Plant Growth-Promoting Rhizobacterium Isolated from Guarana, a Tropical Plant.从热带植物瓜拉那中分离出的植物促生菌伯克霍尔德氏菌RZ2MS16的基因组序列草图
Genome Announc. 2016 Mar 17;4(2):e00125-16. doi: 10.1128/genomeA.00125-16.
9
Complete genome sequences for 59 burkholderia isolates, both pathogenic and near neighbor.59株伯克霍尔德菌分离株的全基因组序列，包括致病菌株和近缘菌株。
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PLoS One. 2013 Nov 4;8(11):e79614. doi: 10.1371/journal.pone.0079614. eCollection 2013.