College of Marine Life Sciences and MOE Key Laboratory of Marine Genetics and Breeding, Ocean University of China, Qingdao, China.
Department of Chemistry and The Swire Institute of Marine Science, The University of Hong Kong, Hong Kong, China.
Nat Commun. 2023 Apr 11;14(1):2033. doi: 10.1038/s41467-023-37759-4.
Thiosulfate oxidation by microbes has a major impact on global sulfur cycling. Here, we provide evidence that bacteria within various Roseobacter lineages are important for thiosulfate oxidation in marine biofilms. We isolate and sequence the genomes of 54 biofilm-associated Roseobacter strains, finding conserved sox gene clusters for thiosulfate oxidation and plasmids, pointing to a niche-specific lifestyle. Analysis of global ocean metagenomic data suggests that Roseobacter strains are abundant in biofilms and mats on various substrates, including stones, artificial surfaces, plant roots, and hydrothermal vent chimneys. Metatranscriptomic analysis indicates that the majority of active sox genes in biofilms belong to Roseobacter strains. Furthermore, we show that Roseobacter strains can grow and oxidize thiosulfate to sulfate under both aerobic and anaerobic conditions. Transcriptomic and membrane proteomic analyses of biofilms formed by a representative strain indicate that thiosulfate induces sox gene expression and alterations in cell membrane protein composition, and promotes biofilm formation and anaerobic respiration. We propose that bacteria of the Roseobacter group are major thiosulfate-oxidizers in marine biofilms, where anaerobic thiosulfate metabolism is preferred.
微生物的硫代硫酸盐氧化作用对全球硫循环有重大影响。在这里,我们提供的证据表明,各种海杆菌谱系中的细菌对海洋生物膜中的硫代硫酸盐氧化作用很重要。我们分离并测序了 54 株与生物膜相关的海杆菌菌株的基因组,发现了保守的硫代硫酸盐氧化作用和质粒的 sox 基因簇,这表明它们具有特定小生境的生活方式。对全球海洋宏基因组数据的分析表明,海杆菌菌株在各种基质(包括石头、人工表面、植物根系和热液喷口烟囱)上的生物膜和垫状生物中大量存在。代谢转录组学分析表明,生物膜中大多数活跃的 sox 基因属于海杆菌菌株。此外,我们还表明,海杆菌菌株可以在有氧和无氧条件下生长并将硫代硫酸盐氧化为硫酸盐。代表性菌株形成的生物膜的转录组学和膜蛋白质组学分析表明,硫代硫酸盐诱导 sox 基因表达和细胞膜蛋白组成的改变,并促进生物膜形成和无氧呼吸。我们提出,海杆菌群中的细菌是海洋生物膜中主要的硫代硫酸盐氧化菌,在那里优先进行无氧硫代硫酸盐代谢。