Toxicology and Computational Biology Group, Centre for Bioinformatics, Maharshi Dayanand University, Rohtak, India.
J Biomol Struct Dyn. 2024 Feb-Mar;42(3):1443-1454. doi: 10.1080/07391102.2023.2199874. Epub 2023 Apr 12.
Several generations of anti-epileptic drugs (AEDs) are available but have several associated side effects apart from a limited success rate. Drug repositioning strategies have gained importance in the last two decades owing to lower failure rates and economic burden. Drugs with similar side effect profiles may share a common mechanism of action and thus can be linked to other disease treatments. The present study was carried out to identify the newly approved drug candidate(s) as AEDs using clinical side-effects drug repositioning strategy. The clinical side effect similarity of drugs available in the SIDER v4.1 database was estimated against common side effects of 5 major marketed AEDs, using the 'dplyr' package library in the R. Further drugs were filtered based on Blood Brain Barrier permeability prediction and FDA-approval status. Molecular docking studies were performed for selected 26 hits (drugs) against previously identified epilepsy target receptors: Voltage-gated sodium channel α2 (Nav1.2), GABA receptor α1-β1 (GABAr α1-β1), and Voltage-gated calcium channel α-1 G (Cav3.1). Only 2 drugs (Ziprasidone and Paroxetine) showed better binding affinities against studied epilepsy receptors Nav1.2, GABAr α1-β1, and Cav3.1, than their corresponding standard AEDs, i.e. Carbamazepine, Clonazepam, and Pregabalin, respectively. Ziprasidone reportedly showed seizure-like symptoms in ∼3% of patients and was hence omitted from further study. The MDS study of docked complexes of Paroxetine with selected epilepsy target receptors showed stable RMSD values and better interaction energies. The study reveals Paroxetine as a potential candidate to be repurposed for 1st line epileptic seizure medication.Communicated by Ramaswamy H. Sarma.
有几代抗癫痫药物(AED)可用,但除了成功率有限之外,还有几种相关的副作用。由于失败率较低且经济负担较小,药物重定位策略在过去二十年中变得越来越重要。具有相似副作用特征的药物可能具有共同的作用机制,因此可以与其他疾病治疗相关联。本研究旨在使用临床副作用药物重定位策略,确定新批准的候选药物(AED)。使用 R 中的 'dplyr' 包库,根据 SIDER v4.1 数据库中可用药物的临床副作用相似性,对 5 种主要市售 AED 的常见副作用进行了估计。进一步根据血脑屏障通透性预测和 FDA 批准状态对药物进行了筛选。对 26 种命中药物(药物)进行了分子对接研究,针对先前确定的癫痫靶受体:电压门控钠通道 α2(Nav1.2)、GABA 受体 α1-β1(GABAr α1-β1)和电压门控钙通道 α-1G(Cav3.1)。只有 2 种药物(齐拉西酮和帕罗西汀)对研究中的癫痫受体 Nav1.2、GABAr α1-β1 和 Cav3.1 的结合亲和力优于相应的标准 AED 药物,即卡马西平、氯硝西泮和普瑞巴林。据报道,齐拉西酮在约 3%的患者中出现类似癫痫发作的症状,因此被排除在进一步研究之外。用选定的癫痫靶受体对接复合物的 MDS 研究表明,稳定的 RMSD 值和更好的相互作用能量。该研究表明帕罗西汀是一种潜在的候选药物,可以重新用于一线癫痫发作药物。由 Ramaswamy H. Sarma 传达。